| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6990 |
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| Symbol | |
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| ID | 6280039 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 3367557 |
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| End bp | 3368996 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642618013 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT family |
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| Protein accession | YP_001890649 |
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| Protein GI | 187921617 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0598431 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAGAC TCAAACTCGG TGCCGGTGCA GTGGCGTTTG CGCTCGCCGT GCTCGCGGGC
TGCACGCTCG ATCCGCACTA TGAACGGCCG GCGGCGCCTG TGGCGGTGGC GTATCCGCAA
GGCGATGCGT ACGAAAGCAC GAGCACGGCT GCGGCCACGG TCGCAAAGAG CGCGAGCGCT
ACCGTCGTGG TACCGCCGCT TGCCGTCGAT ACCGCATGGC GCAGTTTCTT TCGCGACGAA
CGTTTGCAAC GATTGATCGA AATCGCGCTG GCGAACAACC GCGACTTGCG CGTGGCGGCG
TTGAATGTTG CCGAATATGA AGCGCAATAC CGCATCACAC GCGCCGCGCT CGCGCCGTCG
ATTAGCGCGA GCGGCAGCCT GACTCGTGAG CGGACTCAAG GCGTGACGAG TAGTGTCAGC
GACCTCAACG TCGGCACGAC GTCGTGGGAA ATCGATTTCT TTGGACGCCT GCGGAGCCTG
AAGCGTCAGG CGCTGGAAAA CTATCTTGCA ACAGATGCGT CGCGGCAAAG CACGCAGATC
AGCCTGATCG CGACGGTGGC GACCGACTAT CTGACCTTGC TGTCCGATGA ACGCCTGTTG
CAGTTGACCG AAGATACGGT CAAGGCGGAT CAGTCGACTT ACGACGTGAC GAAGCGCGTC
CAGGAGTTGG GCAATTCTTC TCTGCTCGAC GTGCAACAGG CCGAGAACTC GTTGGCCAGT
GCGAAGGCGA GTCTCGCGTC TTACCGTCGT GCTGTCGCGC AGGATCGCAA CAACCTGATC
GCTATACTCG GCGCGCCGAT TCCCGATGAC CTCCCGCCTG CCCGCTCATT CGACGACGAG
TCGATGTTCG CCGACATCGG TGCGGGCGTG CCGTCGCTGC TGCTCACCCG TCGTCCGGAC
ATCGTGCAGG CGGAGCACGC GTTGAAAGCG GCGAATGCAA ACATCGGCGC CGCGCGCGCC
GCGTTTTTTC CGAAGATCGA ACTGACCGCG ACGGCCGGCA CGTCGAGTTC GACGCTCTCG
AGTCTGTTCA AGGCGGGCAC GGGAGCGTGG GCATTTGCGC CGAGCGTATC GGTGCCGATC
TTCGATTACG GCAGCAACAA GGCGTCGCTC GATGTCGCGA AGATCGAGAA GCAGATCGAG
GTCGCCGACT ATGAAAGCAC GATCCAGACG GCGTTCAAGG AAGTTTCGAA TGCGCTGACG
GCGCGCGCCA CCTATGTCGA TCAGGTGCTG GCGGATCGCG AATACGTGGC GTCCTCGCAG
CGGTACTACA CGTTGGCCGA AGCGCGTTAC AAGGCGGGCA CCGATAGCTT TCTCACGTTC
CTCGATGCGC AGCGCACGCT CTACACCGCG CAGCAGCAGC TTGCGACCGA TACGCTGTCG
CGGCAGGCGA ATCTCGTGAC TTTGTACAAG GTGTTGAGCG GCGGTTGGGA GCAGGGCTGA
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| Protein sequence | MMRLKLGAGA VAFALAVLAG CTLDPHYERP AAPVAVAYPQ GDAYESTSTA AATVAKSASA
TVVVPPLAVD TAWRSFFRDE RLQRLIEIAL ANNRDLRVAA LNVAEYEAQY RITRAALAPS
ISASGSLTRE RTQGVTSSVS DLNVGTTSWE IDFFGRLRSL KRQALENYLA TDASRQSTQI
SLIATVATDY LTLLSDERLL QLTEDTVKAD QSTYDVTKRV QELGNSSLLD VQQAENSLAS
AKASLASYRR AVAQDRNNLI AILGAPIPDD LPPARSFDDE SMFADIGAGV PSLLLTRRPD
IVQAEHALKA ANANIGAARA AFFPKIELTA TAGTSSSTLS SLFKAGTGAW AFAPSVSVPI
FDYGSNKASL DVAKIEKQIE VADYESTIQT AFKEVSNALT ARATYVDQVL ADREYVASSQ
RYYTLAEARY KAGTDSFLTF LDAQRTLYTA QQQLATDTLS RQANLVTLYK VLSGGWEQG
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