| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6979 |
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| Symbol | |
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| ID | 6278190 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 3355655 |
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| End bp | 3356614 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642618002 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_001890638 |
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| Protein GI | 187921606 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 66 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCACCG TCGCGATCGC GATCTTTTCC GGCGTGCAGG CGCTCGACGT CGCCGGTCCC
GTCGACGTGT TTTCCGAAGC CAACCGCTTC ATCGCGCCCG CGGATGCCTA CGAAGTGAAG
TTGATCAGCG CCGAAGCCGC ACCGCTGCGC GCGTCCAACG GCATGATGCT GATCGCCGAC
GCGACCTTCG GCCAGGCACG CGGTCCGTTC GATCTTGCGC TGGTCGCGGG CGGCCCGGCG
CTGCCGGACA CCGCACCTGA GGCGCCACTA TTGGAGTGGC TGGCGAACGT CGCCACACAA
TGCGGCCGCT ACGGTTCGAT CTGCACCGGC GCATTCGCGC TCGGTCACGC GGGCCTGCTC
GACGACCGCA ACGTGACGAC GCATTGGCAG CACGCCGCGC AGCTGGCGGC GCAATTTCCA
AAGGCGCGCG TCGACTTCGA CCGCATCTAT CTGCGCGATG GGCAACTCGT CACATCGGCC
GGCGTGACCG CGGGCATCGA TCTGTCGCTC GCGTTAGTCG CCGAGGATCA TGGCCCGCAC
ACGGCGCTCG CCGTCGCCAA ACGGCTGGTG GTGTTCGCAC AGCGGCAAGG CGGCCAGTCG
CAATTCAGCC CCTACCTGAC CGCGCCCGCC GACGACACCT CGCCGGTCGC CAAAGTCCAG
GCGCACGTCA TGGAACGGAT TCGCGAGAGC TTTTCGGTGA AGCAACTCGC GGAGGTCGCG
GGCATGAGCG CCCGCAACTT CGCGCGCGTG TTCGTGCAGG AGACCGGCGT GACGCCGCAT
GAATTCGTCG AACGCGCCCG CGTGGATGCG GCGCGCAAGC TGCTCGAAAG CAGCGGTGCG
GCGCTCAAGG CGATTGCGTA CGACTGCGGC TTCGGCACGG CGGACCGCAT GCGCATTGTC
TTCACCAAAC GAATCGGCGC GACGCCGATG CAGTATCGCG AGCGCTTTCG CTCGGCCTGA
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| Protein sequence | MPTVAIAIFS GVQALDVAGP VDVFSEANRF IAPADAYEVK LISAEAAPLR ASNGMMLIAD
ATFGQARGPF DLALVAGGPA LPDTAPEAPL LEWLANVATQ CGRYGSICTG AFALGHAGLL
DDRNVTTHWQ HAAQLAAQFP KARVDFDRIY LRDGQLVTSA GVTAGIDLSL ALVAEDHGPH
TALAVAKRLV VFAQRQGGQS QFSPYLTAPA DDTSPVAKVQ AHVMERIRES FSVKQLAEVA
GMSARNFARV FVQETGVTPH EFVERARVDA ARKLLESSGA ALKAIAYDCG FGTADRMRIV
FTKRIGATPM QYRERFRSA
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