| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6978 |
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| Symbol | |
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| ID | 6280159 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 3354614 |
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| End bp | 3355549 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642618001 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_001890637 |
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| Protein GI | 187921605 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 65 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTAATCA AAAACCTTCT CCGAAGGCTC GACCTCACCA CGCTGCAACT CTTTCTCGCG
GTCTACGAGG AAGGCACGCT CACGCGTGCC GCCGAGCGCG AGGCGATCGC CGTTTCCGCC
GCGAGCAAGC GTCTGCTCGA ACTCGAACAG GCGGTCGGCG CCACGCTGTT CCAGCGCAAC
GCGCGCGGCA TGACGCTCAC GCCGGCGGGC GAAACGCTGT TGCACCACGC GCGCCGCGTG
ATGCGCGACA TCGAGAACAT CGGCATTGAA CTGGCCGGTC ATGCGAGCGG CGTGCGCGGC
TACGTGCGCA TGATGGCCAA CCTCTCGGCG ATCGTCGAAT TCCTGCCGGA GGATTTGCGC
GCGTTCCAGT TGCAGCATGA GCGCGTCAAG CTCGATCTGG AGGAGCGGCC GAGCGGCGGC
GTGGTCGAAG CGGTCGACGA CAGCCTCGTC GACGTCGGCA TCTGTTCCGG CGATGCCGAC
ACGCGCGATC TGCACGTTGA ACACTACCGG CACGATTCGC TGGTGCTCGT GATGCGCGAC
GATCATCCGC TGGCGGCGCG CGAAAGCGTT GCCTTTGTCG AAACGCTGGA TGGCGATCAC
GTCGGTCTGC ACGCCGCGAG TTCGATCAAT GCTCGCACGC ATCTCGCCGC GCGTCAGGCG
GGCAAGCCGC TGCGGCTGCG CATTCACGTG CCCGGCTTCG ATGCGGTCTG CCGGATGGTG
CAGGCCGGCA TGGGCGTCGG CGTATTGCCG CTGAAGGTGT ATCAACTCAT GGGCCGGCCG
CTGGGTCTCG TCGGTGCACC GCTCGAAGAC GACTGGTCGG CGCGCAGCCT CGTGCTGGTG
GTGCGCGACG TCGATGCATT GTCGCCAGTG AGCCGCCTGT TGTTCGACCA TCTGCGCTCC
ATCGAAGACT CGGAAGCCCC GCCTACCATC GCTTGA
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| Protein sequence | MVIKNLLRRL DLTTLQLFLA VYEEGTLTRA AEREAIAVSA ASKRLLELEQ AVGATLFQRN
ARGMTLTPAG ETLLHHARRV MRDIENIGIE LAGHASGVRG YVRMMANLSA IVEFLPEDLR
AFQLQHERVK LDLEERPSGG VVEAVDDSLV DVGICSGDAD TRDLHVEHYR HDSLVLVMRD
DHPLAARESV AFVETLDGDH VGLHAASSIN ARTHLAARQA GKPLRLRIHV PGFDAVCRMV
QAGMGVGVLP LKVYQLMGRP LGLVGAPLED DWSARSLVLV VRDVDALSPV SRLLFDHLRS
IEDSEAPPTI A
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