| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6964 |
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| Symbol | |
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| ID | 6278624 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 3340206 |
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| End bp | 3340943 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642617988 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001890624 |
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| Protein GI | 187921592 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTACT CGTGGGATTG GGGTGTGTTG CTGCAGGTCG TGTCTACCGG CGAGCACACG
ACGTACCTCG GATGGCTGTT TTCCGGCCTG CTAAACACCG TGCTGCTCAC CGTGTCGGCC
TACGCGCTGG CGCTCGTGGT CGGTACCGGA TTTGGAATTC TTCGCACGCT GCCGAGCCGG
CCTGCGTCGA TGCTCGGCAC CGCGTACGTG TCGGTGTTCC GCGGCGTGCC GCTGATCGTG
CAGTTCTTTA TCTGGTTCTT TGTCGTGCCG GAGCTGGTGC CGACGGAGTT GGGCGACTGG
TTCAAAAACC TGCCGCCGTA CACGCAGTTT TTGTCGGTAT CGATCTTCTC GCTCGGCATC
TATACAGGAT CACGTATCTG CGAACAGGTG CGCGCCGGCA TTCAGGCGCT GCCGCGCGGC
CAGTTCGACG CGGGGTTCGC ACTCGGTCTG ACGCGTGCGC AGACTTACCG TTACGTGTTG
CTGCCGGTAA CGTTTCGCAC CATTCTCGGT CCGCTCACCT CCGAGTTTCT GATCATTTCA
AAAAATTCCG CTGTCGCTTC GACCATCGGC CTATTGGAAT TGTCGGGGCA GGCGCGTCAG
CTGGTCGATT ACACGGCACA GCCCTATGAA TCGTTTATCT GCGTGACGCT GGCCTATATG
GCGCTCAACT TTGCGATTCT GCACGGCATG AACTGGATTC GTCGCCAAAC CCGTCTGCCG
GGCTTGCTGG GAGATTGA
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| Protein sequence | MDYSWDWGVL LQVVSTGEHT TYLGWLFSGL LNTVLLTVSA YALALVVGTG FGILRTLPSR
PASMLGTAYV SVFRGVPLIV QFFIWFFVVP ELVPTELGDW FKNLPPYTQF LSVSIFSLGI
YTGSRICEQV RAGIQALPRG QFDAGFALGL TRAQTYRYVL LPVTFRTILG PLTSEFLIIS
KNSAVASTIG LLELSGQARQ LVDYTAQPYE SFICVTLAYM ALNFAILHGM NWIRRQTRLP
GLLGD
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