| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6956 |
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| Symbol | |
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| ID | 6278101 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 3330037 |
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| End bp | 3333060 |
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| Gene Length | 3024 bp |
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| Protein Length | 1007 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642617980 |
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| Product | D-lactate dehydrogenase (cytochrome) |
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| Protein accession | YP_001890616 |
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| Protein GI | 187921584 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0247] Fe-S oxidoreductase
[COG0277] FAD/FMN-containing dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAATC CCACTTCCGC TTTACTCGTC AAGCCGATCC ACCTGGTTCC GTCCGCCGCG
CGTCTGACGA GTCCGCTCGC GCAACATCTG CGCAAATCAT TGCGCGGCGA CGTGTTGTTC
GATGCGGCGA GCCGTGGCCG TTACGCGACC GATGCATCGA TCTATCAGAT CACGCCGATC
GGTGTCGTGG TTCCGCGCGA CCAGGACGAT CTGCGCATTG CACTGGAAAT CGCGCGCAGC
GAAAAAGTGC CGCTGCTCGC GCGCGGCGCG GGCACGAGCC AATGCGGCCA GACGGTTGGC
GAAGCGCTGG TGATCGACAC GAGCAAATGG TTGAACAACA TCGTCGCCTT CGATGCCGAA
GCGCGCACGG TGACGGTCGA ACCAGGCGTC GTGCTGGATC ATCTGAACGC GTGGCTCAAG
CCACACGGTC TGTGGTTTCC GGTGGATGTT TCGACGGCCG CGCAATGCAC GATCGGCGGC
ATGGCCGGCA ACAATTCGTG CGGCTCGCGC TCGATCGAAT ACGGCAACAT GGTGCACAAC
GTCGACGCAA TCGACGCGAT TCTCGCCGAC GGCAGCGAAG CGCATTTCGC CTCATTGCGC
GAGGCGCCGC AAGGCGCGCG CTTGCAGCAG ATACTCGCTG GCGTGAAGCA AATCGCCGAA
CGCGAGCGCG ATGAAATCGT GGCGCGTGTG CCGAAAGTCT TGCGCCGCGT GGCGGGCTAC
AACATCGACG TGTTCGATTG CCAGAATCCG CGCGCCTATA CCGACGACGG CGTCGCGAAT
CTCGCGCATC TGCTGGTCGG CTCGGAAGGC ACGCTCGCGT TCAGCCGGCA ATTGACGCTC
AGGCTTGCGC CGCTGCCCGT GCATAAAACG CTCGGCGTGG TCAACTTTCC GACCTTCTGG
CAGTCGATGA ACCTCACGCA GCACATCGTC AAGCTGAAAC CGGTGGCGGT GGAGTTGGTC
GATCGCACGA TGATCGATCT CGCGATGAGC AATCCGGCGT TTCGTCCGGT GATCGGCAAG
GCGCTGGTCG GCGAACCGCA AGCCATTCTG CTGGTGGAGT TCGCAGGCGA GGACCGCGAC
GCGCAACTCG CGTCGCTCAA GCAACTCACG GAACTGATGG CCGATCTCGG CTTGCCCGAT
TCGGTCGTCG AGATGCCCGA CGCGAACGAA CAGAAAGCGT TGTGGGAAGT CCGCAAGGCC
GGGCTCAATA TCATGATGAG CATGAAGGGC GATGGCAAGC CGGTGTCCTT CATCGAAGAT
TGCGCCGTGC CGCTCGAACA TCTTGCTGAG TACACGAGCC GCCTGACCGA GGTGTTCCAT
CGACATGGCA CGGAAGGCAC GTGGTATGCG CATGCGAGCG TCGGCACGCT GCACGTGCGG
CCGATTCTCG ACATGCGCCG CGACGGTGCG CAGAAGATGC GCGCGATCGC CGACGAAGCC
GCGGCCCTCG TACGCGAGTA CAAGGGCGCC TATTCGGGCG AGCACGGCGA CGGACTGTGC
CGCGGCGAAT GGGTCGCGTG GCAGTACGGG CCGCGCCTGA ATCAGGCGTT CAGCGAGATC
AAGGCGCTGT TCGATCCGGA CAACCGCTTC AATCCCGACA AGATCGTGCG TCCGCCGAAA
ATGGACGACG CGCGCAATTT CCGCTTCGCA CCGGGCTATA AGGAACATCG CATAGATACG
GCGCTCGACT GGTCGGCATG GAATGTCGAA CGCGATCCGC TGACCGGACA GGAGAGCTTG
CCGGGCAGCG GTAACGATCT GGCCGGCGGT CTCGCGAAAG CCGTCGAGAT GTGCAACAAC
AACGGCCATT GCCGCAAGTT CGACGCGGGC ACCATGTGCC CCAGCTATCG CGTGACGAAG
GACGAACAGC ACGTCACGCG CGGACGCGCG AACACGTTGC GCCTCGCCAT TTCCGGGCAA
CTCGGAGAAG CGGGTCTCGC GAGCGACGAG GTCAAGGAAA CGCTCGATCT GTGCGTGTCG
TGCAAAGGCT GCAAACGCGA TTGCCCAACC GGCGTCGATA TGGCGAAGTT CAAGATCGAG
GCACGGGCGG CGCGCGTCAA GCGTCACGGG CTGCGTCTGC GTGACAAGCT GGTGGCTTTC
ATGCCGCGGT ACGCGTCGAC GGCGAGCCGC ATGCCGGGCT TGATGGCGCT CGCCGATAAC
GTGCCGGTGC TGTCGGCGTG GCTCAAGCGG TCCGTGGGTT TCGCGCCCGA GCGCAGCTTG
CCGCGCTTCA AGAAGTCTTT TTTGGCCGAT GCGGTGTCGT CGCGCAACGC AGCCCAAGGT
GCCGAACTCA AAGAAGTCGT GCTATTCGTC GACACGTTCA ACAACAACAT GGAGCCGGAG
AACGCGCGCG CCGCGCAGCA AGTGTTGGAG GCTGCGGGTT ATACGGTGCA CTTCAACACG
CGCCAGGGCG AGCGGCCCGT GTGTTGCGGC CGCACGTTCC TCGCGGCGGG TCTTGTGGAT
GAAGCGAAGC AGGAAGCACG GCGCATGCTC GATCTGTTCA AGCCGTTCGT GGAGCGCGGT
GTGCCGGTCG TCGGGTTGGA GCCGTCGTGC TTGCTGTCGT TACGCGACGA ATTCCTGCAC
TACGGTTTCG GCGACGAAGC GCAGCGGTTG TCGAAACAGG CATTTCTATT CGAAGAGTTT
CTGGTGCGGG AGGAAAAGGC CGGGCGTCTG GAGCTTGCGT TGAAGCCTTT GGCGAAGCAG
CAGGCGCTGG TGCATGGCCA TTGCCATCAG AAAGCCTTCG ACGCCTTCAC GCCCGTGCAA
ACCGTGTTGA AGTGGATTCC TGAGTTGAAG GTATCGACGG TTGAATCGTC GTGCTGCGGA
ATGGCGGGCA GTTTCGGCTA CGAGGCCGAG CATTACGCGA CGTCACAAGC GATGGCGGAG
CTTTCTCTGC TGCCGGCGGT GCGCAAGATG GACGGCGACA CGCTCATGGT CGCGGACGGC
ACGAGTTGCC GGCATCAGAT CCACGACGGC GCGGGAGTCG ACGCGATCCA CGTGGCGCGC
GTGCTGGCGA TGGCGTTGCG GTAA
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| Protein sequence | MTNPTSALLV KPIHLVPSAA RLTSPLAQHL RKSLRGDVLF DAASRGRYAT DASIYQITPI
GVVVPRDQDD LRIALEIARS EKVPLLARGA GTSQCGQTVG EALVIDTSKW LNNIVAFDAE
ARTVTVEPGV VLDHLNAWLK PHGLWFPVDV STAAQCTIGG MAGNNSCGSR SIEYGNMVHN
VDAIDAILAD GSEAHFASLR EAPQGARLQQ ILAGVKQIAE RERDEIVARV PKVLRRVAGY
NIDVFDCQNP RAYTDDGVAN LAHLLVGSEG TLAFSRQLTL RLAPLPVHKT LGVVNFPTFW
QSMNLTQHIV KLKPVAVELV DRTMIDLAMS NPAFRPVIGK ALVGEPQAIL LVEFAGEDRD
AQLASLKQLT ELMADLGLPD SVVEMPDANE QKALWEVRKA GLNIMMSMKG DGKPVSFIED
CAVPLEHLAE YTSRLTEVFH RHGTEGTWYA HASVGTLHVR PILDMRRDGA QKMRAIADEA
AALVREYKGA YSGEHGDGLC RGEWVAWQYG PRLNQAFSEI KALFDPDNRF NPDKIVRPPK
MDDARNFRFA PGYKEHRIDT ALDWSAWNVE RDPLTGQESL PGSGNDLAGG LAKAVEMCNN
NGHCRKFDAG TMCPSYRVTK DEQHVTRGRA NTLRLAISGQ LGEAGLASDE VKETLDLCVS
CKGCKRDCPT GVDMAKFKIE ARAARVKRHG LRLRDKLVAF MPRYASTASR MPGLMALADN
VPVLSAWLKR SVGFAPERSL PRFKKSFLAD AVSSRNAAQG AELKEVVLFV DTFNNNMEPE
NARAAQQVLE AAGYTVHFNT RQGERPVCCG RTFLAAGLVD EAKQEARRML DLFKPFVERG
VPVVGLEPSC LLSLRDEFLH YGFGDEAQRL SKQAFLFEEF LVREEKAGRL ELALKPLAKQ
QALVHGHCHQ KAFDAFTPVQ TVLKWIPELK VSTVESSCCG MAGSFGYEAE HYATSQAMAE
LSLLPAVRKM DGDTLMVADG TSCRHQIHDG AGVDAIHVAR VLAMALR
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