| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6955 |
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| Symbol | |
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| ID | 6278100 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 3328955 |
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| End bp | 3329995 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642617979 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_001890615 |
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| Protein GI | 187921583 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.737934 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCAGC CCGGCTGGCC GCGCTTGTCC AGGATTGCGC ACTTTTTCGG AGTGGCAAGC
CGTCGCACGC GGGCAGCCGT ATACTGGCGC TCATTCAGTC ACGACAAGTA TTTCGCCCGC
TTCGTGAACA CCAGACCGCC CGTGCCCGTG AGCCACTCCT CTGAAACGCC GTTCGGCCTT
CAGTCGGTGT GTCACACGCT GAGCAGCGCG AACGCGAATC TGGACCGTTT CGCGTGGCTC
GGCGACCGGC TGGCCATCGC CCTCTGGACA CGCGACACGG AAGAAGCCGA GACCGTCTAC
GAGCGTCCCG GCCATCACAC GCTGTCGTGC TATCTGGACG GCGGCTATCG CACCGAACGC
CAGAAAATGC CAGGGCATTA CGGCGCGCCG TCGCGGCTCT GCGCGCTGCC CGGCGAGCAC
GAATCACGCT GGTGGGTGCG CGGGCACATG CATTTCATGC ACCTGTACTT CCTGCCGGAG
CACTTCACGC AGCGCGCGGT TCAGGAACTC GACCTCGAAC CGCGCGAACT GACGCTCGCC
GATCGCACGT ATTTCGAAGA CGCCCGCATC GCCACGTTAT GTCAGTCGCT GGCGAACGAA
GACTGGCAGG ATCCGGACGG CTTGCTGCGC ACCAACGAGA CCGCGCATCA GGTGCTGAGT
CTGCTGTTGC GCGCGCAAGG TGTGCGCCGC ACGGATGCAT CGCTCAAAGG CGGCTTGTCG
GTCGCGACTC GCCGGCGCCT GCATGACTAC ATCGAAAGCC ATCTCTCGCA GGCGCTCACG
CTCGGCGAGC TGGCCGGCGT AGCGGCGCTG TCGGAATTTC ATCTTGCGCG CATGTTCCGC
ACCTCGTTCG GACTGCCACC CGCCGCGTGG ATCGCGCAGC AGCGGCTCGA ACGCGCTCGC
ACGTTGTTGC GCACCACGGC GCTGCCGCTC GCGCAGGTCG CCGAGCAATG CGGATACGCA
AACGCCAGCC ATTTCAGCCA TCGTTTCCGC GAGAGCGTCG GCGTGGCGCC GACCGCGTAT
CGGCAGGCTG TCGCCGCCTG A
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| Protein sequence | MPQPGWPRLS RIAHFFGVAS RRTRAAVYWR SFSHDKYFAR FVNTRPPVPV SHSSETPFGL
QSVCHTLSSA NANLDRFAWL GDRLAIALWT RDTEEAETVY ERPGHHTLSC YLDGGYRTER
QKMPGHYGAP SRLCALPGEH ESRWWVRGHM HFMHLYFLPE HFTQRAVQEL DLEPRELTLA
DRTYFEDARI ATLCQSLANE DWQDPDGLLR TNETAHQVLS LLLRAQGVRR TDASLKGGLS
VATRRRLHDY IESHLSQALT LGELAGVAAL SEFHLARMFR TSFGLPPAAW IAQQRLERAR
TLLRTTALPL AQVAEQCGYA NASHFSHRFR ESVGVAPTAY RQAVAA
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