| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6940 |
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| Symbol | |
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| ID | 6280378 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 3311633 |
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| End bp | 3312010 |
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| Gene Length | 378 bp |
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| Protein Length | 125 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642617967 |
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| Product | Endoribonuclease L-PSP |
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| Protein accession | YP_001890603 |
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| Protein GI | 187921571 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
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| TIGRFAM ID | [TIGR00004] endoribonuclease L-PSP, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0336608 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATTCCCA CGGCACCCAC GCCGGTCGGC CCGTTCTCGC ACGCTGCCGA GGCCGACGGC
TGGGTCTTCC TGACCGGCCA GATGCCGACC TCCCCCACCG ACGACACCGC GCCGCTTCCC
GAAGGCGTGG TCGCCCAGAC CAAGCGCGTG ATGGACAATC TCGTGCTGGT ACTCCAGGGG
CTCGGTCTCG GCCTGCAAAA CGTGGTGGCG ACACGCATCT TCCTCACCGA GTTCAAGCGC
GATTACACGC CGATGAACGA GATCTACCGC GCCTACTTCC CCGCCGACGC GCTGCCCGCA
CGAACCTGCA TCGGCGTCAC CGCACTGGCG CGCGAAGCGC TGGTCGAGAT CGATTTCATC
GCCAAACGGC CGGGTTGA
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| Protein sequence | MIPTAPTPVG PFSHAAEADG WVFLTGQMPT SPTDDTAPLP EGVVAQTKRV MDNLVLVLQG
LGLGLQNVVA TRIFLTEFKR DYTPMNEIYR AYFPADALPA RTCIGVTALA REALVEIDFI
AKRPG
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