Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_6935 |
Symbol | |
ID | 6279671 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 3305805 |
End bp | 3307004 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642617962 |
Product | beta-lactamase |
Protein accession | YP_001890598 |
Protein GI | 187921566 |
COG category | [V] Defense mechanisms |
COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACCAG CAGGCCTTTC CGCGTCCCGG CTGTCGGCGC TGACCAACGC CATGCAAGGC TATGTGGAGC GCGGCGAAGT GGCGGGCGTG GTGTCGATGG TCTGGCGGCG CGGCGAGATC GGCTATTTCG AGCCGCTCGG CTGGCGCGAC GAGGCGGCGC AGTTGCCGAT GGAGCGCGAC ACGCTGTTCC GCATTGCCTC CATGACCAAG CCGGTGACCA GCGCCGCGGT CCTGCTGCTG ATCGAAGAAG ATCGGCTCGC CCTCGACACG CCGATCTCAC TCTGGTTGCC GGAATTGTCC GCGCCGCGTG TGCTGCGCGA CCCCGCCGGC CCGCTCGACG AAACCGACCC GGCCAGAGCG TCGCTCACCG TGCTGGATCT GCTGACGCAT CGCGCCGGCT TCGCCTACCA CTTCACCGCG ACCGGGCCGC TTGCCGAGGC GTACGCCGCC GCTTTCAACG GATTCGAAGC GCGCATGGAC GGCAACGCCT GGCTTGCCCG TATCGCCAGT CTGCCGCTCA TGTTCCAGCC CGGTTCGCGC TGGCACTATG GCGTTGCGAC CGATGTGCTC GGCGTGCTGA TCGAGCGCGT GAGCGGCATG CCGCTCGGCG AGTTTTTCCG GACGCGGATC TTCGAGCCGC TCGGCATGCG CGATACGGCG TTCTGGGTGC CTGACGCGCA ACTCGGCCGG TTGGCCACCG CTTATGCTAT CGAACAGGGC TCGGGGCGGC GTATTGTCGA AGACCATCCG TCGTCGAGCC GATGGGCCGA TCCGGACCGC TTCCAGAGCG GCGGCGGCGG GCTGGTTTCG ACGGCGCACG ACTATCTGCA ATTCGCGCAA CTGCTGCTCG GCCGCGGGCG GGTCGGCACG ACGCGTTTGT TGTCGCATCG CTCGGTCGAT CTGATGCGCT CCAATTTTCT GACGCGCGAC CAACGCCGCG TGTCCGCCTT CGGTCATGCG CTGTGGGCGG GCCAAGGGTT CGGCCTCGGC TTGTCCATAG TCGACGATCC GGCGCAGCAG CTGCCGCTCG GCTATCGCTC GATGGGATCG TTCGGCTGGC CGGGTGCGTA TGGCACGAGC TGGTTCGGCG ATCCCGTGGA AGACCTGATC GGCCTGATGC TGATTCAAAG GCGCTCAGTC GAACCGTTTT CAATGGCAGT GGACTTCGAA CGCCGCGTGT ACGATGCAAT TGACGATTGA
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Protein sequence | MQPAGLSASR LSALTNAMQG YVERGEVAGV VSMVWRRGEI GYFEPLGWRD EAAQLPMERD TLFRIASMTK PVTSAAVLLL IEEDRLALDT PISLWLPELS APRVLRDPAG PLDETDPARA SLTVLDLLTH RAGFAYHFTA TGPLAEAYAA AFNGFEARMD GNAWLARIAS LPLMFQPGSR WHYGVATDVL GVLIERVSGM PLGEFFRTRI FEPLGMRDTA FWVPDAQLGR LATAYAIEQG SGRRIVEDHP SSSRWADPDR FQSGGGGLVS TAHDYLQFAQ LLLGRGRVGT TRLLSHRSVD LMRSNFLTRD QRRVSAFGHA LWAGQGFGLG LSIVDDPAQQ LPLGYRSMGS FGWPGAYGTS WFGDPVEDLI GLMLIQRRSV EPFSMAVDFE RRVYDAIDD
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