Gene Bphyt_6935 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_6935 
Symbol 
ID6279671 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp3305805 
End bp3307004 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content66% 
IMG OID642617962 
Productbeta-lactamase 
Protein accessionYP_001890598 
Protein GI187921566 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACCAG CAGGCCTTTC CGCGTCCCGG CTGTCGGCGC TGACCAACGC CATGCAAGGC 
TATGTGGAGC GCGGCGAAGT GGCGGGCGTG GTGTCGATGG TCTGGCGGCG CGGCGAGATC
GGCTATTTCG AGCCGCTCGG CTGGCGCGAC GAGGCGGCGC AGTTGCCGAT GGAGCGCGAC
ACGCTGTTCC GCATTGCCTC CATGACCAAG CCGGTGACCA GCGCCGCGGT CCTGCTGCTG
ATCGAAGAAG ATCGGCTCGC CCTCGACACG CCGATCTCAC TCTGGTTGCC GGAATTGTCC
GCGCCGCGTG TGCTGCGCGA CCCCGCCGGC CCGCTCGACG AAACCGACCC GGCCAGAGCG
TCGCTCACCG TGCTGGATCT GCTGACGCAT CGCGCCGGCT TCGCCTACCA CTTCACCGCG
ACCGGGCCGC TTGCCGAGGC GTACGCCGCC GCTTTCAACG GATTCGAAGC GCGCATGGAC
GGCAACGCCT GGCTTGCCCG TATCGCCAGT CTGCCGCTCA TGTTCCAGCC CGGTTCGCGC
TGGCACTATG GCGTTGCGAC CGATGTGCTC GGCGTGCTGA TCGAGCGCGT GAGCGGCATG
CCGCTCGGCG AGTTTTTCCG GACGCGGATC TTCGAGCCGC TCGGCATGCG CGATACGGCG
TTCTGGGTGC CTGACGCGCA ACTCGGCCGG TTGGCCACCG CTTATGCTAT CGAACAGGGC
TCGGGGCGGC GTATTGTCGA AGACCATCCG TCGTCGAGCC GATGGGCCGA TCCGGACCGC
TTCCAGAGCG GCGGCGGCGG GCTGGTTTCG ACGGCGCACG ACTATCTGCA ATTCGCGCAA
CTGCTGCTCG GCCGCGGGCG GGTCGGCACG ACGCGTTTGT TGTCGCATCG CTCGGTCGAT
CTGATGCGCT CCAATTTTCT GACGCGCGAC CAACGCCGCG TGTCCGCCTT CGGTCATGCG
CTGTGGGCGG GCCAAGGGTT CGGCCTCGGC TTGTCCATAG TCGACGATCC GGCGCAGCAG
CTGCCGCTCG GCTATCGCTC GATGGGATCG TTCGGCTGGC CGGGTGCGTA TGGCACGAGC
TGGTTCGGCG ATCCCGTGGA AGACCTGATC GGCCTGATGC TGATTCAAAG GCGCTCAGTC
GAACCGTTTT CAATGGCAGT GGACTTCGAA CGCCGCGTGT ACGATGCAAT TGACGATTGA
 
Protein sequence
MQPAGLSASR LSALTNAMQG YVERGEVAGV VSMVWRRGEI GYFEPLGWRD EAAQLPMERD 
TLFRIASMTK PVTSAAVLLL IEEDRLALDT PISLWLPELS APRVLRDPAG PLDETDPARA
SLTVLDLLTH RAGFAYHFTA TGPLAEAYAA AFNGFEARMD GNAWLARIAS LPLMFQPGSR
WHYGVATDVL GVLIERVSGM PLGEFFRTRI FEPLGMRDTA FWVPDAQLGR LATAYAIEQG
SGRRIVEDHP SSSRWADPDR FQSGGGGLVS TAHDYLQFAQ LLLGRGRVGT TRLLSHRSVD
LMRSNFLTRD QRRVSAFGHA LWAGQGFGLG LSIVDDPAQQ LPLGYRSMGS FGWPGAYGTS
WFGDPVEDLI GLMLIQRRSV EPFSMAVDFE RRVYDAIDD