| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6931 |
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| Symbol | |
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| ID | 6280121 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 3301677 |
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| End bp | 3303116 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642617958 |
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| Product | succinic semialdehyde dehydrogenase |
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| Protein accession | YP_001890594 |
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| Protein GI | 187921562 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01780] succinate-semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.80699 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGAAT TTCTCCGTAC CGGACATTTC ATTGGCGGCG AGTGGTACGA AGGCGCCGAC
ACGTATGCCG TTTTGAACCC CGCGACCGGT GAGGTCGTCG CGCACGTGGC CAAAGGTGGC
GCGGCGGAAA CGGCGCAGGC TATCGCGGCG GCCGAGCGCG CGTTTCCCGC ATGGCGTGCA
CTGACCGCGA AAGAACGCAG CGCCCGCGTC AAACGCTGGG GCGAATTGAT GCTGGAGAAT
CGCGACGCGC TCGCCGAACT GCTGACGCTC GAGCAAGGCA AGCCGCTTGC CGAAGCGCGC
GGCGAAGTGG GCTATGCGGC GAGCTTCTTC GAATGGTTCG CGGAGGAAGC GAAGCGGGCA
TACGGCGACG TCATCCCGAG CCCGAATCCG AACGCGAAGA TTATCGTGAC GCGCGAACCG
GTCGGCGTGG TCGCGGCGAT CACACCGTGG AATTTCCCGC TTGCCATGAT CACGCGCAAG
GCCGGTCCGG CGCTCGCAGC TGGTTGCACG ATGGTGCTGA AGCCATCGGA AGAAACGCCG
TTGTCCGCGT TTGCTTTGGC GGTGCTGGCC GCGAAAGCGG GCATCCCGCC CGGCGTGTTC
AACATCGTTT CCGGCGATGC CGTGGCGATC GGCGGCGCGC TCACGGAATC CGACGTGGTG
CGCAAACTGT CGTTCACTGG ATCGACGCGC GTCGGCAAAC TGCTGGCGAA GCAGTCGGCG
GACACGCTGA AGAAGTTGTC GCTCGAACTC GGCGGCAACG CGCCTTTCAT CGTCTTCGAC
GACGCGGACC TCGATGCCGC CGTGCAAGGC GCGATGGCTT CGAAATTCCG CAACACCGGG
CAGACGTGTG TGTGCGTCAA CCGCTTCTAC GTGCAGGACG GCATCTACGA CGCGTTCACG
TCCGCACTGA CGCAAGCGGT GCGTAAGATG CGCGTCGGCA ATGCGTTGCA AGGCGAAGTC
GAACAAGGTC CATTGATCAA CCAGGCTGCG CTGAAGAAGG TCGAAACCCA CGTGGCCGAC
GCATTGCAAA AAGGCGCGAA GATCTTGACC GGCGGCAAGC CGCACACGCT CGGCGGCACT
TTCTACGAGC CGACTGTTCT GGCCGACGCC GACAACTCGA TGCTGATCGC CGGGGAAGAA
ACCTTCGGAC CAGTCGCTGC GTGCTTCCGC TTCAAGACCG AAGCGGAAGC GATCGAAGCG
GCCAACGACA CACCTTTCGG CTTGTCGGCG TATTTCTACA CGCGCGACCT GGCGCGCGCA
TGGCGCGTCG GCGAAGCGCT GGAGAGCGGC ATGGTCGGCA TCAACGAAGG GATCGTGTCC
ACGGAGGTTG CGCCGTTCGG CGGCGTCAAG CAGTCGGGAC TCGGCCGCGA AGGCTCGAAG
TACGGGCTCG ATGAATACAC CGAACTGAAG TACATGATGA TGGGCGGCCT CGGACGCTGA
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| Protein sequence | MNEFLRTGHF IGGEWYEGAD TYAVLNPATG EVVAHVAKGG AAETAQAIAA AERAFPAWRA
LTAKERSARV KRWGELMLEN RDALAELLTL EQGKPLAEAR GEVGYAASFF EWFAEEAKRA
YGDVIPSPNP NAKIIVTREP VGVVAAITPW NFPLAMITRK AGPALAAGCT MVLKPSEETP
LSAFALAVLA AKAGIPPGVF NIVSGDAVAI GGALTESDVV RKLSFTGSTR VGKLLAKQSA
DTLKKLSLEL GGNAPFIVFD DADLDAAVQG AMASKFRNTG QTCVCVNRFY VQDGIYDAFT
SALTQAVRKM RVGNALQGEV EQGPLINQAA LKKVETHVAD ALQKGAKILT GGKPHTLGGT
FYEPTVLADA DNSMLIAGEE TFGPVAACFR FKTEAEAIEA ANDTPFGLSA YFYTRDLARA
WRVGEALESG MVGINEGIVS TEVAPFGGVK QSGLGREGSK YGLDEYTELK YMMMGGLGR
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