| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6928 |
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| Symbol | |
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| ID | 6279225 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 3298452 |
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| End bp | 3299249 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642617955 |
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| Product | Pili assembly chaperone, N-terminal |
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| Protein accession | YP_001890591 |
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| Protein GI | 187921559 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.35944 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.811433 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAGCGC CTTTTTTTGT GCTCTTCATT TGCGATAGGA GCAGGCGGAA GGTGATGAAG
CTGCCCAGAA AAACGGCGAT GGGAATTGTC TTCGCAGGCA TGCTGCTGGC CGGCAGCGCA
GCCGCGAGCG TGACGATAGG CGGCACGCGT CTCGTGTATC CGCTCGATCA ACGCGAGGTT
ACGGCGAAAC TGAACAATGA CAGTCATGTA CCTTCGCTGG TTCAGGTCTG GATGGACGAC
GGCAATGCGG ATGCCAAGCC CGGAGAAGTG AAAGTCCCAT TCCTGATTAC GCCGCCGATT
TTCCGCATGA ACGCAATGAA GGCGCAGACG CTGCGCGTCA TGTACACCGG CGAGCCACTG
CCGCAAGACC GTGAGTCGAT CTATTGGCTC AATGTACTCG ACATTCCGCC GAAAGCGAAT
CATGAGCCGC AAGCCAACAC ATTGAGCCTT GCCTATCGAA CCCGTATCAA GGTGTTCGTG
CGGCCGGCCA GTTTGCCTGG AAAACCGCAA GATGCACCCG CGCAACTGAC CTGGAAACTT
GCAGCGTCGC CGAACGGAGC AGGGCAGGCG GTCAGCGTAT CGAACCCGAC GCCTTACTAC
GTGTCGTTTA GCGAGGTCGA CGTCGAAAGC GCCGGTCATT CCTTTACGAA CAAGCGGGGC
GGCATGGTCG CGCCGCGCGC TTCAGTGGTC TTGCCGATCG ACGAGATGAG CGCCGTCGCA
GCGGGCGCCA GGGTGCGCTA CATCGCGATC AGCGACTACG GCGGTCCAAT CAACGGCGAC
GCGCCGCTCG GCGAGTAA
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| Protein sequence | MRAPFFVLFI CDRSRRKVMK LPRKTAMGIV FAGMLLAGSA AASVTIGGTR LVYPLDQREV
TAKLNNDSHV PSLVQVWMDD GNADAKPGEV KVPFLITPPI FRMNAMKAQT LRVMYTGEPL
PQDRESIYWL NVLDIPPKAN HEPQANTLSL AYRTRIKVFV RPASLPGKPQ DAPAQLTWKL
AASPNGAGQA VSVSNPTPYY VSFSEVDVES AGHSFTNKRG GMVAPRASVV LPIDEMSAVA
AGARVRYIAI SDYGGPINGD APLGE
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