| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6925 |
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| Symbol | prfC |
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| ID | 6278696 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 3292636 |
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| End bp | 3294237 |
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| Gene Length | 1602 bp |
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| Protein Length | 533 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642617952 |
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| Product | peptide chain release factor 3 |
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| Protein accession | YP_001890588 |
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| Protein GI | 187921556 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG4108] Peptide chain release factor RF-3 |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00503] peptide chain release factor 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.209121 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.303865 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGTCT CCGAACTAAA ACGCCGCCGC ACGTTCGCGG TCATTTCCCA CCCGGACGCC
GGTAAGACCA CGCTCACGGA AAAGCTGCTG CTGTTCTCGG GCGCGATCCA GATCGCCGGC
ACCGTGAAGG GCCGCAAGAG CAACCGCTAC GCAACGTCCG ACTGGATGGA GATTGAAAAG
CAGCGGGGCA TTTCGGTGGC GAGCTCGGTG ATGCAGTTCG AGTACGGCGA CGCCGTCATC
AACCTGCTCG ACACGCCGGG CCACGAAGAC TTCTCCGAAG ATACCTACCG CGTGCTGACC
GCGGTCGACG CCGCGGTCAT GGTGATCGAC GGCGCGAACG GCGTCGAGGC GCAAACGCTC
AAGCTGCTCG AAGTCTGCCG CAGCCGCAAG ACGCCGATCG TCACCTTCAT CAACAAGCTC
GACCGCGAAG TGCGCGAGCC GCTCGAACTG CTCGACGAAA TCGAGCAGCA TCTGGGCGTT
GCCGCCGTGC CGTTCACGTG GCCGATCGGC ATGGGTAAGG ACTTCCAGGG CGTCTACGAT
ATTCAGCGCG ATCAGGTGCG CATTTTCCGC GCGGGACAGG ACAAGGCCGG CGGCGAAGTG
GAAACGCTGC AAGCGCCGAG CGACGAAGAA GGCGAGCGCC GCTTCGGCCA CGCCTGGATC
AAGGCGAAGG AAGAGATCGA TCTGATCACC GGCGCGTCGC CCGATTTCGA TCGCGAGCAG
TTCCTCGCCG GTCAGCAATC GCCGGTGCTG TTCGGCTCGG CGATCAACAA CTTCGGCGTG
AAGGAAATTC TGGACGCGCT GGTCGACCTC GCGCCGCCGC CGTCGATGCG CATGACCGTG
CAGCGTCCGG TCATGCCGGA CGAGCCGAAG TTCACCGGCG TCGTGTTCAA GGTGCAGGCG
AACATGGATC TGGCGCACCG CGACCGCGTG GCATTCATCC GCGTGTGCTC GGGGCATTTC
GAACGCGGCA TGGCCGTGAA GGTGACCCGC ACGAACAAGA CGTTCCGCGC CAATAACGTG
GTGACGTTTC TGTCGCAACG TCGTGAGACG GTGAGCGAGG CGTATCCGGG CGACATCATC
GGTATTCCGA ATCATGGCAC GCTGAGTCTC GGCGATACGT TGACCGAAGG CGAGCAGTTG
CAATTCGTCG GCCTGCCGTT TTTCGCGCCG GAAATTTTCC AGACCGTCGA AGTGGTCGAT
CCAATGCGCG CCAAGCAGCT CGGCGAGGCG CTCAAGCAAC TCGGCGAAGA AGGCGCGATT
CAGGTGTTTC GTCCGGAAGT GGGCGGCCTG ATGATTCTCG GCGCGGTCGG GCAACTGCAG
TTCGAAGTGG TGTCGCACCG TTTGTCGACG GAATACAAGG TCGACGTGCG CATGGCGCCG
GCGCGTTACC GCATGTCGCG CTGGGTGACT TGCGACGACG CAGCCGAACT GCGCCGCTTC
ACCGATTCGT ACGCGGCGCG GATCGCGCTC GATGCCTCCG ACGCACCGAC GTATCTGGCC
TCGCACGTGT CGGAGATCGA AGTCGCGCAG AAGGCGTGGC CGAAGATCGT GTTCAACGAG
TTGCGCGAGC ACTCGGGCGC GCCGTTCAAG AAGGCGATGT AA
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| Protein sequence | MSVSELKRRR TFAVISHPDA GKTTLTEKLL LFSGAIQIAG TVKGRKSNRY ATSDWMEIEK
QRGISVASSV MQFEYGDAVI NLLDTPGHED FSEDTYRVLT AVDAAVMVID GANGVEAQTL
KLLEVCRSRK TPIVTFINKL DREVREPLEL LDEIEQHLGV AAVPFTWPIG MGKDFQGVYD
IQRDQVRIFR AGQDKAGGEV ETLQAPSDEE GERRFGHAWI KAKEEIDLIT GASPDFDREQ
FLAGQQSPVL FGSAINNFGV KEILDALVDL APPPSMRMTV QRPVMPDEPK FTGVVFKVQA
NMDLAHRDRV AFIRVCSGHF ERGMAVKVTR TNKTFRANNV VTFLSQRRET VSEAYPGDII
GIPNHGTLSL GDTLTEGEQL QFVGLPFFAP EIFQTVEVVD PMRAKQLGEA LKQLGEEGAI
QVFRPEVGGL MILGAVGQLQ FEVVSHRLST EYKVDVRMAP ARYRMSRWVT CDDAAELRRF
TDSYAARIAL DASDAPTYLA SHVSEIEVAQ KAWPKIVFNE LREHSGAPFK KAM
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