| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6920 |
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| Symbol | |
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| ID | 6279181 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 3285846 |
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| End bp | 3286895 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642617947 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_001890583 |
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| Protein GI | 187921551 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0338646 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.105366 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGTTCG CGAAAGGGCC GCTCATGGCC CGCCGTTTGT TCCGCACTTC GCTCTCCGTC
ACGGCAGCCG CTGCGTGCTT CGCCGGCCTC GCCGTGTCGG GCGCCGCGCA AGCCGCCGAC
TCCGGCAAGA TCGGCCTCGG TCTGCCGCTG CTGACGTCGC CGTTCTGGCA GTCGTACAAC
AACTATCTGC CCAAGTACGC GAAAGAGAGC GGCCTCGACA TCCTCGCGCC AGTCAATTCG
AACGGCGATC CGGTCCAGCA GATCACGGAC ATGAACAACC TGCTGAACCT CGGTGCGAAG
GGCATCGTGG TCGGCCCGCT GGATTCGGCG GCGATCAGTC GCGCGCTCGA CGCCGCCGCT
GCGAAGAACG TCCCGGTGGT TGCGGTGGAC GTCGCGCCGA CGCAAGGCAA AGTCGCGATG
GTGGTGCGCG CCGATAACCA CGCGTACGGC GAGAAGGCGT GCAAATACAT CGGCGAGCAC
GTGAAGTCGG GCAAGGTCGT GCAGATCATG GGCGACCTGG CATCGGTCAA CGGGCGCGAT
CGCTCGGAAG CATTCCGCTC GTGCCTGAAG GGTTATCCGG GTTTGACGCT GCTGGAGATT
CCGGCGAGCT GGAAGGGTGA CGTCGCGGCC ACCGCGCTCG ACAGTCTGCT GACCGCGAAT
CCCGACGTGA AGGCCATTTA CATGCAGGCA GGCGGCGTTT ATCTGTCACC CACGCTGCAA
ACCTTGCGTC GCAAGCAGAT GCTGTTTCCG GCCGGCGATG CGAAGCATGT CGTGATCGTC
AGCAACGACG GCATTCCTCA GGAGTTCGAC GCGATCCGCC GCGGCGATAT CGACGCGACC
GTGTCGCAGC CCGCCGATTC GTACGCGAAA TACGGGCTGT TCTATATCAA GGCGGCGTTG
GCTGGTCAGA CCTTCAAGCC GGGCCCGACC GATCACGGCA GCAACATCAT CCAGCTGGCG
CCGGGCATTC TGGAAGACCA ATTGCCCGCG CCGCTCGTGA CGAAATCGAA CGTCGACGAC
AAAGCCTTGT GGGGTAACAC CGTTAAATGA
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| Protein sequence | MSFAKGPLMA RRLFRTSLSV TAAAACFAGL AVSGAAQAAD SGKIGLGLPL LTSPFWQSYN
NYLPKYAKES GLDILAPVNS NGDPVQQITD MNNLLNLGAK GIVVGPLDSA AISRALDAAA
AKNVPVVAVD VAPTQGKVAM VVRADNHAYG EKACKYIGEH VKSGKVVQIM GDLASVNGRD
RSEAFRSCLK GYPGLTLLEI PASWKGDVAA TALDSLLTAN PDVKAIYMQA GGVYLSPTLQ
TLRRKQMLFP AGDAKHVVIV SNDGIPQEFD AIRRGDIDAT VSQPADSYAK YGLFYIKAAL
AGQTFKPGPT DHGSNIIQLA PGILEDQLPA PLVTKSNVDD KALWGNTVK
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