| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6915 |
|---|
| Symbol | |
|---|
| ID | 6277847 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | - |
|---|
| Start bp | 3280406 |
|---|
| End bp | 3281446 |
|---|
| Gene Length | 1041 bp |
|---|
| Protein Length | 346 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642617942 |
|---|
| Product | Pyridoxal 4-dehydrogenase |
|---|
| Protein accession | YP_001890578 |
|---|
| Protein GI | 187921546 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0866383 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 0.474905 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCAA CGATCGGATC GAAGATCGGG CAACGGCGCC GCATCGGCCG CGGGCCGTTG
CAGGTGACCG GTTTGGGACT CGGCACGGCG CCGCTCGGCG GCCTCTACCG CGATCTGTCC
GATGAAGAAG CTCATGCCAC CATCGCCGCC GCGTGGGATG CCGGCGTGCG CTACTTCGAC
ACCGCCCCAC ACTACGGCAA CACGAAGGCC GAGCATCGTC TGGGCGACGC CTTGCGGCGC
TATCCGCGCG CCGACTATGT GTTGTCCACC AAGGTGGGCC GCCGCTTCGT GCCGCGCACC
ACGCCTTTCG ACGACAAGGA AGGCTGGCAA AATCCGCTGC CTTTCGAAGC GATCTACGAC
TACACGCACG ACGGCATTCT GCGGTCGTTC GAAGATAGCC AGCAGCGCCT CGGCATCGTC
GATATCGACA TTCTGCTGGT GCACGACATT GGCCGTGTCA CGCACGGCGA CAATCATCCC
CATTACTGGC GGCAACTGAC CGAAGGCGGC GGCTTTCGCG CGTTGGACGC GTTGCGCTCT
TCTGGCGCGA TCAAGGCTGT CGGACTCGGC GTCAACGAAG GCGCGGCGAT ACTGGATGCG
ATGGCCGAGT TCGATATCGA TTGCGCGTTG CTCGCGGGCC GTTATACGCT CCTCGAACAG
ACCACGCTCG ACGACCTGTT GCCGGCCTGT GAAAAACGTG GCGTCAGCAT CCTGTTAGGC
GGCGCGTTTA ATTCGGGCAT TCTGGCGCGC GGTGTCCAAG GCGATCTGAA ATTCAACTAC
GGCGAGGCGC CGCCCGAAGT GATCGAGCGC GTCGCGCGGC TTGAAGCAGT GTGCCGTACG
CACGGCGTGC CGCTCGCGGC CGCCGCCTTG CAGTTTCCAT ATGCGCATCC GACGGTCGCC
ACGGTGTTGA CCGGCGCGCG CAGTGCCGAT GAATTGCGCG AGAACGCCGC GTCGTTCGAG
CTGCCGATCC CCGCGGCCTT GTGGTTCGCG TTGCGTGAGG AAGGTTTGCT CGACAGCCGC
GCGCCCGCGC CAGAGGATTG A
|
|---|
| Protein sequence | MTATIGSKIG QRRRIGRGPL QVTGLGLGTA PLGGLYRDLS DEEAHATIAA AWDAGVRYFD
TAPHYGNTKA EHRLGDALRR YPRADYVLST KVGRRFVPRT TPFDDKEGWQ NPLPFEAIYD
YTHDGILRSF EDSQQRLGIV DIDILLVHDI GRVTHGDNHP HYWRQLTEGG GFRALDALRS
SGAIKAVGLG VNEGAAILDA MAEFDIDCAL LAGRYTLLEQ TTLDDLLPAC EKRGVSILLG
GAFNSGILAR GVQGDLKFNY GEAPPEVIER VARLEAVCRT HGVPLAAAAL QFPYAHPTVA
TVLTGARSAD ELRENAASFE LPIPAALWFA LREEGLLDSR APAPED
|
|---|
| |