Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_6904 |
Symbol | |
ID | 6278737 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 3271187 |
End bp | 3272296 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642617931 |
Product | N-acylglucosamine 2-epimerase |
Protein accession | YP_001890567 |
Protein GI | 187921535 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2942] N-acyl-D-glucosamine 2-epimerase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.298573 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAGAGCA TGAACCCACC CGCTGCTTCC ACCATCGCAC TCGCTGCCCG TCTGCGCGAA CACTTCACAG GCGTGGTGCT GCCGATCTGG CGCGGTCCGG GTTTCAACAC CGCACTGAAG CTGCCCTACG AAGCGGTCAG CGCAGAAGGT CACGAGCCGC TGCCCGCCGA GCGTTACCGG GCCATGGCCT GCGCGCGACA ATTGTTCGTG TTCTCGCAAG CAGGCGACGC AGCCCATGCG CAGGCGTTGT TCGATTCGTT GACGCACACC TTTCAGGACA CGCGCCACGG TGGATGGTTC TACAGCGTGG ATGCGCAAGG CGCACCGCTT GACACCACCA AGGACCTGTA CACGCATGCG TTCGTGGTGT TTGCGTGCGC GGAGTACGCC CGGCGCTCTG GCAATCGCGA CGCGCTGGAA ATCGTGCATC GCACGTCCGC GCTGATCCAG TCGAACTTCG CCGCCGAGGA CGATCTGTTC AACGCCGCGC TGACCGCGGA CTTCGCCGCC GTGACCGGCA CGCCGATCCA GAACCCTTTG ATGCACTTGA CCGAAGCCTG GCTGGCCGCT CGCGAAGCCA CGCATGACAA CGCTTTCGAC GCCGCGCTAC GGCGTCTCGC CGGCGCGGTT ACGCGGCGCT TCGTGCATGC GCCCACGGGC TGCATCGCCG AATTGCCGAT TGGCGCGGAC GACAACCGGT TGGAACCCGG GCATCAGTTC GAATGGTTCT GGCTGGTGAA ACAGGCGGGC GCCGTGTTCG AAGACTCGGG TCTCGCCGAG GCCATGCCGC GTGCGTTCAG CTTCGCGCAG CAACATGGCG TGGACCGGGA AACCGGCGGC GTGTACGCCT CGCTCGACGA AACCGGCCGG ATCAAGGACG AGACTCAGCG GATCTGGGCC CAAACCGAAT ATCTACGCGC GCTGGCAAGC CATGACGAAC TGTCGGCGCG GGACACGCTG CCCCGGCAAA TCGAACGGTT CCAGCAACGA TTTCTGCGAC CGCAGGGCTG GTTCGAATGC AAAACGCCGG CGGGCGAAGT GGCGCGTGCC GACATGCCGT CGACCACGCC GTATCACCTC GCCACCGCCT ACGAGGCGTT GCCGGCCTGA
|
Protein sequence | MQSMNPPAAS TIALAARLRE HFTGVVLPIW RGPGFNTALK LPYEAVSAEG HEPLPAERYR AMACARQLFV FSQAGDAAHA QALFDSLTHT FQDTRHGGWF YSVDAQGAPL DTTKDLYTHA FVVFACAEYA RRSGNRDALE IVHRTSALIQ SNFAAEDDLF NAALTADFAA VTGTPIQNPL MHLTEAWLAA REATHDNAFD AALRRLAGAV TRRFVHAPTG CIAELPIGAD DNRLEPGHQF EWFWLVKQAG AVFEDSGLAE AMPRAFSFAQ QHGVDRETGG VYASLDETGR IKDETQRIWA QTEYLRALAS HDELSARDTL PRQIERFQQR FLRPQGWFEC KTPAGEVARA DMPSTTPYHL ATAYEALPA
|
| |