Gene Bphyt_6904 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_6904 
Symbol 
ID6278737 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp3271187 
End bp3272296 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content65% 
IMG OID642617931 
ProductN-acylglucosamine 2-epimerase 
Protein accessionYP_001890567 
Protein GI187921535 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2942] N-acyl-D-glucosamine 2-epimerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.298573 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAGCA TGAACCCACC CGCTGCTTCC ACCATCGCAC TCGCTGCCCG TCTGCGCGAA 
CACTTCACAG GCGTGGTGCT GCCGATCTGG CGCGGTCCGG GTTTCAACAC CGCACTGAAG
CTGCCCTACG AAGCGGTCAG CGCAGAAGGT CACGAGCCGC TGCCCGCCGA GCGTTACCGG
GCCATGGCCT GCGCGCGACA ATTGTTCGTG TTCTCGCAAG CAGGCGACGC AGCCCATGCG
CAGGCGTTGT TCGATTCGTT GACGCACACC TTTCAGGACA CGCGCCACGG TGGATGGTTC
TACAGCGTGG ATGCGCAAGG CGCACCGCTT GACACCACCA AGGACCTGTA CACGCATGCG
TTCGTGGTGT TTGCGTGCGC GGAGTACGCC CGGCGCTCTG GCAATCGCGA CGCGCTGGAA
ATCGTGCATC GCACGTCCGC GCTGATCCAG TCGAACTTCG CCGCCGAGGA CGATCTGTTC
AACGCCGCGC TGACCGCGGA CTTCGCCGCC GTGACCGGCA CGCCGATCCA GAACCCTTTG
ATGCACTTGA CCGAAGCCTG GCTGGCCGCT CGCGAAGCCA CGCATGACAA CGCTTTCGAC
GCCGCGCTAC GGCGTCTCGC CGGCGCGGTT ACGCGGCGCT TCGTGCATGC GCCCACGGGC
TGCATCGCCG AATTGCCGAT TGGCGCGGAC GACAACCGGT TGGAACCCGG GCATCAGTTC
GAATGGTTCT GGCTGGTGAA ACAGGCGGGC GCCGTGTTCG AAGACTCGGG TCTCGCCGAG
GCCATGCCGC GTGCGTTCAG CTTCGCGCAG CAACATGGCG TGGACCGGGA AACCGGCGGC
GTGTACGCCT CGCTCGACGA AACCGGCCGG ATCAAGGACG AGACTCAGCG GATCTGGGCC
CAAACCGAAT ATCTACGCGC GCTGGCAAGC CATGACGAAC TGTCGGCGCG GGACACGCTG
CCCCGGCAAA TCGAACGGTT CCAGCAACGA TTTCTGCGAC CGCAGGGCTG GTTCGAATGC
AAAACGCCGG CGGGCGAAGT GGCGCGTGCC GACATGCCGT CGACCACGCC GTATCACCTC
GCCACCGCCT ACGAGGCGTT GCCGGCCTGA
 
Protein sequence
MQSMNPPAAS TIALAARLRE HFTGVVLPIW RGPGFNTALK LPYEAVSAEG HEPLPAERYR 
AMACARQLFV FSQAGDAAHA QALFDSLTHT FQDTRHGGWF YSVDAQGAPL DTTKDLYTHA
FVVFACAEYA RRSGNRDALE IVHRTSALIQ SNFAAEDDLF NAALTADFAA VTGTPIQNPL
MHLTEAWLAA REATHDNAFD AALRRLAGAV TRRFVHAPTG CIAELPIGAD DNRLEPGHQF
EWFWLVKQAG AVFEDSGLAE AMPRAFSFAQ QHGVDRETGG VYASLDETGR IKDETQRIWA
QTEYLRALAS HDELSARDTL PRQIERFQQR FLRPQGWFEC KTPAGEVARA DMPSTTPYHL
ATAYEALPA