Gene Bphyt_6903 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_6903 
Symbol 
ID6279841 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp3270219 
End bp3270905 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content65% 
IMG OID642617930 
ProductMgtC/SapB transporter 
Protein accessionYP_001890566 
Protein GI187921534 
COG category[S] Function unknown 
COG ID[COG1285] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.275178 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGGGA ATCTCGAACT CATCGCCCGT TTGATGGTGG CCGCCGCGCT CGGCAGCGTC 
ATCGGCTTCG AGCGGGAGCG GCTTTCGTGG GCCGCGGGTC TGCGCACGCA TATGCTGGTG
TGCGTTGGTT CGGCGCTGAT CATGATTGTC TCGGCGTATG GTTTTGCCGA AGTCCTGAAA
GGCGACCACG TCGTGCTCGA TCCTTCGCGG ATGGCCGCGC AAGTGGTGTC GGGCATCGGC
TTTCTCGGCG CGGGCTCGAT CCTGCTGCGT GGCGAGATCG TGCGCGGACT GACGACGGCG
GCGAGCCTCT GGTCGGTGGC CGCCATCGGT CTCGCGGTCG GCGGCGGGCT GTACACGGCG
GCGATTGCGG CGACCATCAT CATTCTGATC ATCCTGGCCG GCATCAAGCC GCTCGAGCGC
CGCTTCATCA CGGTCAAACA ACGGCGCCAA CTGACGATGA TCGTCGAGCG CGGCGCCATG
ACGTTCCACT CGCTGCACGA CGAACTCGGC GCCGCGAGCC CGCGCGTCAA GCAGTTCGTG
ATGCAGCAAA GCGAAGACGC GCCCGAGTGC GACGAAGTGG TGATCACCTT GCATCGCGTG
TCGAATACCG AATATGAGGC GATCTGCGGG CGCTTGCGGC AACTGCATGG CGTCAAGCAG
TTCCGGCAGG ACGACGCGAC TTCCTGA
 
Protein sequence
MLGNLELIAR LMVAAALGSV IGFERERLSW AAGLRTHMLV CVGSALIMIV SAYGFAEVLK 
GDHVVLDPSR MAAQVVSGIG FLGAGSILLR GEIVRGLTTA ASLWSVAAIG LAVGGGLYTA
AIAATIIILI ILAGIKPLER RFITVKQRRQ LTMIVERGAM TFHSLHDELG AASPRVKQFV
MQQSEDAPEC DEVVITLHRV SNTEYEAICG RLRQLHGVKQ FRQDDATS