Gene Bphyt_6892 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_6892 
Symbol 
ID6280026 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp3256840 
End bp3257490 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content65% 
IMG OID642617919 
ProductFMN-binding negative transcriptional regulator 
Protein accessionYP_001890555 
Protein GI187921523 
COG category[K] Transcription 
COG ID[COG2808] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.199077 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.214366 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACATGC CCGCCCATTT CGAAGAGAAC CGCCCAGAGG TTCTCCATCG CCTGATCGCC 
GAGCAGCCTT TCGGCGCGCT AATCACCAAC GGGCCGAACG GACTCGATGC GAACCACGTG
CCGTTCGAGT TCGAAGTCCC CTCCGCGGCC GGTGAAACGC ACGGCATCCT GCGTGCTCAC
GTTGCACGCG CGAACCCTGT GTGGCAAGAA GCCGCCGCGA ATCCGGAAGC GCTCGTGATC
TTCCAGGGTC CGGCCGCTTA TATTTCGCCG AACTGGTATC CGAGCAAGCA CGAAGCGCAT
CGGCAGGTGC CGACCTACAA CTATATGGTG GTGCATGCTC ACGGCCGCAT CGTCGTGCGC
GACGACGAGT CGTTCGTGCG CGGCCTGGTG GCGCGTCTGA CGCGCAAGAT GGAAGCCGGC
GAACCGGTGC CGTGGAAAAT GGGCGACGCG CCCGCAGACT TCATTTCGCA GATGCTCGGT
GCGATCGTCG GCATCGAGAT CGAGGTGACC CGGCTGGTCG GCAAGTGGAA GCTCGGGCAG
AACAAGGCGG CGGACGACCG CCGCGGCGCC GCCGAAACCC TGCTGGCGCG CTCGAGCGAC
GACCAGCAGG CCGTCGGTCA AGCCATGCTG AATGCACCGC CGGCCTTCTG A
 
Protein sequence
MYMPAHFEEN RPEVLHRLIA EQPFGALITN GPNGLDANHV PFEFEVPSAA GETHGILRAH 
VARANPVWQE AAANPEALVI FQGPAAYISP NWYPSKHEAH RQVPTYNYMV VHAHGRIVVR
DDESFVRGLV ARLTRKMEAG EPVPWKMGDA PADFISQMLG AIVGIEIEVT RLVGKWKLGQ
NKAADDRRGA AETLLARSSD DQQAVGQAML NAPPAF