Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_6892 |
Symbol | |
ID | 6280026 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 3256840 |
End bp | 3257490 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642617919 |
Product | FMN-binding negative transcriptional regulator |
Protein accession | YP_001890555 |
Protein GI | 187921523 |
COG category | [K] Transcription |
COG ID | [COG2808] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.199077 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.214366 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACATGC CCGCCCATTT CGAAGAGAAC CGCCCAGAGG TTCTCCATCG CCTGATCGCC GAGCAGCCTT TCGGCGCGCT AATCACCAAC GGGCCGAACG GACTCGATGC GAACCACGTG CCGTTCGAGT TCGAAGTCCC CTCCGCGGCC GGTGAAACGC ACGGCATCCT GCGTGCTCAC GTTGCACGCG CGAACCCTGT GTGGCAAGAA GCCGCCGCGA ATCCGGAAGC GCTCGTGATC TTCCAGGGTC CGGCCGCTTA TATTTCGCCG AACTGGTATC CGAGCAAGCA CGAAGCGCAT CGGCAGGTGC CGACCTACAA CTATATGGTG GTGCATGCTC ACGGCCGCAT CGTCGTGCGC GACGACGAGT CGTTCGTGCG CGGCCTGGTG GCGCGTCTGA CGCGCAAGAT GGAAGCCGGC GAACCGGTGC CGTGGAAAAT GGGCGACGCG CCCGCAGACT TCATTTCGCA GATGCTCGGT GCGATCGTCG GCATCGAGAT CGAGGTGACC CGGCTGGTCG GCAAGTGGAA GCTCGGGCAG AACAAGGCGG CGGACGACCG CCGCGGCGCC GCCGAAACCC TGCTGGCGCG CTCGAGCGAC GACCAGCAGG CCGTCGGTCA AGCCATGCTG AATGCACCGC CGGCCTTCTG A
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Protein sequence | MYMPAHFEEN RPEVLHRLIA EQPFGALITN GPNGLDANHV PFEFEVPSAA GETHGILRAH VARANPVWQE AAANPEALVI FQGPAAYISP NWYPSKHEAH RQVPTYNYMV VHAHGRIVVR DDESFVRGLV ARLTRKMEAG EPVPWKMGDA PADFISQMLG AIVGIEIEVT RLVGKWKLGQ NKAADDRRGA AETLLARSSD DQQAVGQAML NAPPAF
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