| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6889 |
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| Symbol | |
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| ID | 6278163 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 3249602 |
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| End bp | 3251149 |
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| Gene Length | 1548 bp |
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| Protein Length | 515 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642617916 |
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| Product | transcriptional regulator, GntR family with aminotransferase domain |
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| Protein accession | YP_001890552 |
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| Protein GI | 187921520 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0343806 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.248624 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGACACCG TGATCTTGTC GGATTGGCTC GCCGCGCGGC TCGACCGCAC GGCGGCCGAA
CCGGTCTACC GGCAGACCTT GCGGCTCATG CAGCAGGCGA TCCTGACCGG CCAGTTGCCG
CCGGGCACCA AGCTGCCCAG CTCGCGTACG CTCGCCGAAG ACCTCGGCAT CGCGCGCAAC
ACGGTGCTGC ACGTCTACGA CCAGTTGACC GCCGAAGGCT ACGTGATCTC GACCACCGGC
AGCGGCACCT ACGTCGCCGA CACGCGCCCG GACACCGCCG CCGTGAACAT GCGCCGGAAG
CCGGCAGTGG CGAGCGTCGA CAAAGAAGAC AGCACAGCCA GGGAAACCAC CAAGCCGCCG
AAACGCGATC TCAACGATCT GTCGGCTCGC GGACGGCGTC TGATCGACAA AGCCGGCGTG
TCCGCCAAAC AGTGGGGCGC GTTCATGCCA GGCGTGCCCG ACGTCGCGGA ATTTCCGGCG
CGCACATGGA GCCGCCTGCA GGCTCGTTTG TGGAAGGAAG CCAATCCCGA CCTGCTCACT
TACGCGCCTG GCGGCGGCTA TCGGCCATTG CGGCGGGCGT TGTCGGATTA CCTGCGCGTG
GCGCGTTCGG TGAATTGCAC GCCGGATCAG ATCATCATCA CCACGGGCAT TCATCAATCG
ATCGATCTGG CGGTGCGCCT GTTGACCGAT GTCGGCGACC GCGCGTGGGT GGAAGAACCG
TGTTATTGGG GCGCACGCAG CGTGCTGCAG TCATCGGGGA TTACCCTCGT GCCCGTGCCG
GTGGATGACG AAGGTCTGAA TCCGAGCGAG CAGGACCTGC AACAGCCGCC GCGCCTCGCG
CTCGTCACGC CGTCGCATCA GTATCCGCTC GGCATGGTGA TGAGCCTCGC GCGCCGCCGC
ACGCTGCTCG AATATGCGCG TCAGCACAAT GTGTGGATCA TCGAGGACGA CTACGACAGC
GAGTTCCGCT ACGGCAGCCG TCCGCTCGCG TCGCTGCAAG GACTCGACGA AGCCGGCCAG
GTGATCTACG TGGGCAGTCT GGGGAAGATG CTGTTTCCGG GTTTGCGGAT CGGCTACATG
ATCGCGCCGG AGCATCTGGT GGACACGTTC CGCACGGGCG TGGCCGAGTT GTATCGCGAA
GGTCAGTTGA TGCAGCAGGC GGTGATGACC GAGTTCATCA TGGACGGCCA TCTCACCTCG
CACGTTCGGC GCATGCGTGC GCTCTACGGT GAGCGGCGGC AGATTCTGAT CGATGCGATC
ACCGCGCGCT TCGGCAGCGA ACTGCCGGTG ATGGGTGACG AGGCCGGCCT GCATCTGGTG
CTCGGCCTGC CGGATCACGC GAACGATCGC GCGGTGACTG CCGCCGCTTA TGACGCCGGC
GTGATCGTGC GTCCGCTCGC GAGCTATTAC AGCAGCGATA CGCCCGCGCG TCGCGGGCTG
CTGCTCGGCT ATGCGTGCGT GCCGAACGAC AAGATCGGTC CCGCCTTCGA CACGCTCGCG
CGCGTGATCG AGCAAACCGC GTTGAAGGCG CCGACGCGCG CCGCTTGA
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| Protein sequence | MDTVILSDWL AARLDRTAAE PVYRQTLRLM QQAILTGQLP PGTKLPSSRT LAEDLGIARN
TVLHVYDQLT AEGYVISTTG SGTYVADTRP DTAAVNMRRK PAVASVDKED STARETTKPP
KRDLNDLSAR GRRLIDKAGV SAKQWGAFMP GVPDVAEFPA RTWSRLQARL WKEANPDLLT
YAPGGGYRPL RRALSDYLRV ARSVNCTPDQ IIITTGIHQS IDLAVRLLTD VGDRAWVEEP
CYWGARSVLQ SSGITLVPVP VDDEGLNPSE QDLQQPPRLA LVTPSHQYPL GMVMSLARRR
TLLEYARQHN VWIIEDDYDS EFRYGSRPLA SLQGLDEAGQ VIYVGSLGKM LFPGLRIGYM
IAPEHLVDTF RTGVAELYRE GQLMQQAVMT EFIMDGHLTS HVRRMRALYG ERRQILIDAI
TARFGSELPV MGDEAGLHLV LGLPDHANDR AVTAAAYDAG VIVRPLASYY SSDTPARRGL
LLGYACVPND KIGPAFDTLA RVIEQTALKA PTRAA
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