| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6887 |
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| Symbol | |
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| ID | 6277977 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 3247217 |
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| End bp | 3248266 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642617914 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_001890550 |
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| Protein GI | 187921518 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.31675 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.286829 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAGA TCGGGAAATC GCGCTGCGCC ATCGCTGTCG GTGCTGTGGC GCTCGCGCTG
GGCGCCGCGC AAGTCAATGC AGCGGAATTG TCGGTCGTCA ATTTCGGCGG CGCAAATGGC
GACGCGCAAA AGGTTGCATT CAACCAGCCG TTCGAAAAAG AGACCGGCAA TAAAGTCACC
GCCGTCGAAT ACAACGGCGA GCAGGCCAAA GTAAAAGCGA TGGTCGAAGC GAAGCATGTG
AATTGGGATG TGGTGGAAGT CGAATCGGGC GATATCGGCC GTGGTTGTGA TGAAGGGCTG
TACGAGAAAC TCGACTGGTC GAAGATCGGC AAGAAGTCGG ATCTGATTCC CGAAGCACCG
CAAACCTGCG GCGTGGGCTT CTTCGTGTGG TCGACCGCGC TCGCGTACAA CGCCGACAAG
CTGAAAACGG CGCCGGCCGG CTGGGCCGAT TTCTGGGACG TCAAGAAATT CCCCGGCAAG
CGGGCGATGC GCAAGGGCGC GCGCTACAAC CTCGAATTCG CATTGATGGC CGACGGTGTG
CCGCCGAAGG ACGTCTACAA GGTGCTCGCC ACCAAGGAAG GCCAGGACCG CGCATTCAAG
AAACTCGACG AACTGAAGCC GAACATTCAG TGGTGGGAAG CGGGCGCGCA GCCGCCGCAA
TTCCTCGTAG CGGGCGACGT GGTGATGTCC ACGGCGTATA ACGGCCGCAT CGATGCCGCG
CAAAAGGAAG GCAAGAACCT GAAGGTGGTA TGGAACGGCA GCATCTACGA CCTCGACTAT
TGGGCAATTC CGAAGGGCAC GCCGAACAAG GCGCTGGCCG AGAAGTACAT TGCCTATTCG
ATTTCGTCGA AGCCGCAGCA GGACTACGCG CACAACATCG CGTACGGTCC GGTGAATGTG
GCGGCGATCA AGGCGCTCGA TCCGAAGACG CTTGCGAATC TGCCGAACTC GCCGGCCAAT
GGGAAGAACG CGGTGCTGCA GAACCTGGCG TTCTGGACCG ATCACGGCGA TGAACTGGAG
CAGCGTTTTT CGTCGTGGGC TTCGAAGTAA
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| Protein sequence | MSKIGKSRCA IAVGAVALAL GAAQVNAAEL SVVNFGGANG DAQKVAFNQP FEKETGNKVT
AVEYNGEQAK VKAMVEAKHV NWDVVEVESG DIGRGCDEGL YEKLDWSKIG KKSDLIPEAP
QTCGVGFFVW STALAYNADK LKTAPAGWAD FWDVKKFPGK RAMRKGARYN LEFALMADGV
PPKDVYKVLA TKEGQDRAFK KLDELKPNIQ WWEAGAQPPQ FLVAGDVVMS TAYNGRIDAA
QKEGKNLKVV WNGSIYDLDY WAIPKGTPNK ALAEKYIAYS ISSKPQQDYA HNIAYGPVNV
AAIKALDPKT LANLPNSPAN GKNAVLQNLA FWTDHGDELE QRFSSWASK
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