| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6881 |
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| Symbol | |
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| ID | 6278293 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 3241730 |
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| End bp | 3242545 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642617908 |
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| Product | Lytic transglycosylase catalytic |
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| Protein accession | YP_001890544 |
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| Protein GI | 187921512 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.987079 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.0912273 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCTGC GCGTAAATGA TCGCCCGTCC GCACTGCGAG GCGCCATGGC GAAGCATGCG
TTGCTCGGCG GCCTGATCGT CGCGAGCGCA TGCGCGCCGC TGGTCGCTCG GGCTGCAGAT
ACCGGCGCCG CGCACCATCG TCGGTCCGCT GGCGTAGTCA TGATGATTGG CGGAATGACG
AACGGTGGCA ACGTCACGAC GGACAGCACG CCACAGGTTG CGTCGACGTT CGCGCCGGCT
GTATCCGGCG ATGCCGGCCG GGAGTCTGTG GTAATCGAGT CAGGCCGGCC GCAATCGGAC
GATGCAGTGC GGCAAACGTC GTCGGAGGTC GCATCGCGCG TGATGGCGCT GTCCCCCATC
ATCAACGAAG CGGCCCACGT CGCCGACGTG GACAGCGCAC TGCTGATGGC GGTGATCGAT
GTGGAATCCG GCGGCAATCC GCAAGCGGTG TCGCCCAAAG GCGCAACAGG CCTCATGCAG
TTAATGCCCG GCACCGGTGC GCGGCATGGC GCGTCCGATC TGTTCGACTC ACGCCAGAAC
ATCGCGGCGG GCGCGCGCTA TCTGAAAGCA CTCATGCGCC AGTTCGGCAC CCTTCCGCTC
GCGCTGGCGG CCTATAACGC CGGTGAAGGC GCCGTGCAAA AGTACGGCGG GCAGATACCG
CCTTATGCGG AAACGATGAA CTATGTGCCG AAGGTCATCG CTCGATACAA GTGGTATCAG
AATGCCTCGT CTTCCGCGGG TACGGCATCC GTGCAAGCGG TGCCGAACGG AGCCCGTGGA
GGCTTTATTC TGGTCGGCTC CGGCGGCACG GATTGA
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| Protein sequence | MALRVNDRPS ALRGAMAKHA LLGGLIVASA CAPLVARAAD TGAAHHRRSA GVVMMIGGMT
NGGNVTTDST PQVASTFAPA VSGDAGRESV VIESGRPQSD DAVRQTSSEV ASRVMALSPI
INEAAHVADV DSALLMAVID VESGGNPQAV SPKGATGLMQ LMPGTGARHG ASDLFDSRQN
IAAGARYLKA LMRQFGTLPL ALAAYNAGEG AVQKYGGQIP PYAETMNYVP KVIARYKWYQ
NASSSAGTAS VQAVPNGARG GFILVGSGGT D
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