| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6878 |
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| Symbol | |
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| ID | 6279120 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 3239669 |
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| End bp | 3240550 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642617905 |
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| Product | type II secretion system protein |
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| Protein accession | YP_001890541 |
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| Protein GI | 187921509 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4965] Flp pilus assembly protein TadB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.465681 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.240753 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCTAC TCATTGCTTT TGTCGTCAGT TTCGGCCTGA TTGCCGTCAT TGCGATCGGC
TACAAGTCCG TCAATGGTCT GGCCGGGTCG GTGCCGGACG AAAACCGCAC CTTTCTCGAC
CCGTTGCCCA AGTCGCTGCG CGTGCTGTGG CCACTCGTCA ATTTCGTGGT GCACCACTTC
GGCGGCAAGT TCAGCCGCAA GCTGGTCGAG AAAACGGATC TGCAATTGCG GCTCACGTCG
CTTACGTTTT TGATGAACGC ACACCAGTTC ATCGCGTTGT CGATCATCGC TTCGGTTCTG
GCTACGCTCG TCGCGCTGCT GCTGATGCTG GCGCTTGGCA TGTTTTCGGC GCTCGTGCTG
CTTGGCGTGG CCGTGCTCGG CTACTTCTAT CCGCGCATCT GGACGCGTGA CGTGCGACGC
AGGCGAGTCG CGCGCATTCT CAAGCATCTG CCTATCTACC TCGACTTTCT GACGCTTGCT
GTCGAAGCCG GTCTGAACAT CAACGGGGCG ATTCAGAAGG CCGTCGAAAA AGGACCGGAA
GGGCCGCTGC GATGGGAATT CGAACACGTG CTGCGCGACC TCAAGTCCGG GCTCAACCGC
ATGGAAGCGC TGTATCGCAT GGACGACCGG TTGCGTATCA AGGAAGTGAC GAATCTGGTG
GGCACTGTGG TGCAAGCCGA GCGCATGGGC TCGGGGCTGT CGAAATCACT GCGCTTCCAG
TCGGAACAGC GTCGTTCCGA ACGCTTTCAG CGCGCGGAAA AACAAGCCAT GGAAGCGCCG
GTGAAACTGG TGTTCCCGCT GCTGGTGTTC ATCTTCCCGA TCACCTTCAT CGTGTTGGGA
TTTCCGATCG CGATGAAATT CGTGCAGGAA GGTCTGCTGT GA
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| Protein sequence | MLLLIAFVVS FGLIAVIAIG YKSVNGLAGS VPDENRTFLD PLPKSLRVLW PLVNFVVHHF
GGKFSRKLVE KTDLQLRLTS LTFLMNAHQF IALSIIASVL ATLVALLLML ALGMFSALVL
LGVAVLGYFY PRIWTRDVRR RRVARILKHL PIYLDFLTLA VEAGLNINGA IQKAVEKGPE
GPLRWEFEHV LRDLKSGLNR MEALYRMDDR LRIKEVTNLV GTVVQAERMG SGLSKSLRFQ
SEQRRSERFQ RAEKQAMEAP VKLVFPLLVF IFPITFIVLG FPIAMKFVQE GLL
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