Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_6874 |
Symbol | |
ID | 6277758 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 3234070 |
End bp | 3235170 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642617901 |
Product | Flp pilus assembly protein CpaB |
Protein accession | YP_001890537 |
Protein GI | 187921505 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3745] Flp pilus assembly protein CpaB |
TIGRFAM ID | [TIGR03177] Flp pilus assembly protein CpaB |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.367067 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.327856 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTAAGA AAATTAAATT CCGCTCGCTT CTCGCGAACT CCTGGATACT TCTGTTCCTC GCCGTGCTAG TCGCGGCTGG TCTGACGTTC CTCCTCTACA AATACTTGAG CGACCGCGAA AAAAAGCTCA AAGACGATAT GAGCGCGCAC CGCGTCCGCG CCGGGGTCGT CGTCGTCGTT CCGGCGAGGG ACGTGCCGGT CGACACGCCT TTGTCCAGCA GTGATTTCGT TGCGCGTGAG ATCGACGGTG ATCTGGTCTA CGACGACATG ATCCGTGCGG ACAACTTCGA CAAATATCGC ATGTCGCATC TGGTGAAACC GGTGCGTCGT GGTCTGCCAC TACGTGCCGC CGATATCGAC GCGCTGCACG GCCGTGACTT CTCCGACGTT CTGCGTTCGG GAACGCGGGC TGTCACGGTC GACATCGACA CGGTCAATTC GACTGCCTTG ATGCTACGTC CCGGCAATCG CGTCGACGTG TACTGGATCG GCAAGGTATA TCACCAGGAC AACTCCAACG ACGACAAGAA AGTCGCACAG CTCATGCTGG CGAATACGCT AATCCTTGCC ACTGGCCAGG ACATGCGCCC ACGCGACGCC GGCGAAGCCA TGCAGGAAGA CCCGGCGAAT GCCAACAGCA GCGCCATGAG CCGCCAGCCA GGCGTCGGCT ACACGACGGT CACTCTGGAA GTTCCGGTTG CGGACGCCGG GCGCATTGCG CTTGCACAAA AAATCGGCGG TCTGCGCCTC ATTCTCCGTA ACTCGGATGA CAAGGGCACG AACGGTCCTA GCCTCGTTCA GGAAAACGAT GTGTTCGTCG ACCCGGGCCG CGGAAGGCTG AGCGGCTCCG GTCCGGCGCC GAAAACCGTC GAGATCATTG CTGGCGGTAG CTCGAATAGC AGCACTGTGC TCGTCAGCCA AGGCCCGTCT ACGGCATCCG CCGAGGAACC GCAGAAAACT GCACCGGCGG CGATACCAGC CAGTGTCGAT CAACCGATGC CCGCTTCGCC GCAACGTCAA CCGAGTCTCT ACGAGCAGGC CAACGCCATT GCCCAGCAAT TGCAGAAGGC GACCGCACGC AGCACGTCGA AGCAGAACTA A
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Protein sequence | MLKKIKFRSL LANSWILLFL AVLVAAGLTF LLYKYLSDRE KKLKDDMSAH RVRAGVVVVV PARDVPVDTP LSSSDFVARE IDGDLVYDDM IRADNFDKYR MSHLVKPVRR GLPLRAADID ALHGRDFSDV LRSGTRAVTV DIDTVNSTAL MLRPGNRVDV YWIGKVYHQD NSNDDKKVAQ LMLANTLILA TGQDMRPRDA GEAMQEDPAN ANSSAMSRQP GVGYTTVTLE VPVADAGRIA LAQKIGGLRL ILRNSDDKGT NGPSLVQEND VFVDPGRGRL SGSGPAPKTV EIIAGGSSNS STVLVSQGPS TASAEEPQKT APAAIPASVD QPMPASPQRQ PSLYEQANAI AQQLQKATAR STSKQN
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