| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6858 |
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| Symbol | |
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| ID | 6278618 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 3208808 |
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| End bp | 3209791 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642617885 |
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| Product | malate dehydrogenase |
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| Protein accession | YP_001890521 |
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| Protein GI | 187921489 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0039] Malate/lactate dehydrogenases |
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| TIGRFAM ID | [TIGR01759] malate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.416763 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTAAGC CCGCAAAGCG CGTTGCCGTC ACCGGCGCCG CAGGTCAAAT CGCTTACTCC
CTGCTGTTCC GCATCGCCAA TGGCGACCTG CTCGGCAAGG ACCAACCGGT GATCCTGCAA
CTGCTCGACC TGCCGCAAGC GCAAGGCGCC GTCAAAGGCG TCGTGATGGA ACTGGATGAT
TGCGCATTCC CGCTGCTGTC GGGCGTCGTA ATCACCGACG ATCCCGAAGT TGCATTCAAG
GACGCAGACG TGGCCCTGCT GGTCGGCGCG CGTCCGCGTT CGAAAGGCAT GGAGCGTAAG
GACCTGCTGT CGGCCAACGC TGAAATCTTC ACGGTTCAGG GCAAGGCGCT GAACAAGGTC
GCGAGCCGCG ACGTGAAGGT GCTGGTGGTC GGCAACCCGG CCAACACGAA CGCCTACATT
GCCATGAAGT CGGCGCCGGA TCTGCCGAAG AAGAACTTCA CCGCCATGCT GCGTCTGGAC
CACAACCGTG CGCTGTCGCA ACTGGCCGCC AAGTCGGGCA AGCCGGTCGC GTCGATCGAA
AAGCTGGCTG TGTGGGGCAA CCACTCGCCG ACCATGTACC CGGATTTCCG CTTTGCAACG
GCAGAAGGTC AAGACCTGAC CAAGCTGATC AACGACGACG AATGGAACCG CAACACGTTC
ATCCCGACCG TCGGCAAGCG CGGCGCGGCG ATCATCGAAG CGCGCGGCCT GTCGTCGGCA
GCGTCGGCGG CTAACGCTGC AATCGACCAC GTGCGTGACT GGGTGCTCGG CACGAACGGC
AAGTGGGTCA CCATGGGCAT TCCGTCGGAC GGCTCGTACG GCATTCCGGA AGACATCATC
TACGGCGTGC CGGTCACGTG CGAAAACGGC GAGTACAAGC GCGTCGAAGG TCTGGAAATC
GACGCGTTCT CGCGCGAAAA GATGGACGGC ACGCTAAACG AACTGCTGGA AGAACGCGAA
GGCGTTCAAC ACCTGCTCGG CTAA
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| Protein sequence | MAKPAKRVAV TGAAGQIAYS LLFRIANGDL LGKDQPVILQ LLDLPQAQGA VKGVVMELDD
CAFPLLSGVV ITDDPEVAFK DADVALLVGA RPRSKGMERK DLLSANAEIF TVQGKALNKV
ASRDVKVLVV GNPANTNAYI AMKSAPDLPK KNFTAMLRLD HNRALSQLAA KSGKPVASIE
KLAVWGNHSP TMYPDFRFAT AEGQDLTKLI NDDEWNRNTF IPTVGKRGAA IIEARGLSSA
ASAANAAIDH VRDWVLGTNG KWVTMGIPSD GSYGIPEDII YGVPVTCENG EYKRVEGLEI
DAFSREKMDG TLNELLEERE GVQHLLG
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