| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6848 |
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| Symbol | leuD |
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| ID | 6279402 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 3199744 |
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| End bp | 3200397 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642617875 |
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| Product | isopropylmalate isomerase small subunit |
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| Protein accession | YP_001890511 |
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| Protein GI | 187921479 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0066] 3-isopropylmalate dehydratase small subunit |
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| TIGRFAM ID | [TIGR00171] 3-isopropylmalate dehydratase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0246289 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.577423 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAAAAAT TCATCGTACA CACCGGCGTC GTGGCGCCGC TCGATCGTGA AAACGTCGAC
ACGGACGCGA TCATTCCGAA GCAATTCCTG AAGTCGATCA AGCGCACGGG TTTCGGTCCG
AACGCGTTCG ACGAATGGCG TTATCTCGAC CACGGCGAGC CGGGTCAGGA CAATTCGAAG
CGTCCGCTGA ATCCGGATTT CGTGTTGAAC CAGCCGCGTT ATCAGGGCGC TTCGGTGCTG
CTGGCGCGCA AGAACTTCGG CTGCGGCAGC TCGCGCGAGC ACGCGCCGTG GGCGCTGGAG
CAATACGGCT TTCGTGCGCT GATCGCGCCG AGCTTCGCCG ACATTTTCTA TAACAACTGC
TTCAAGAACG GCGTGCTGCC GATCGTGCTG ACTGAACAGC AAGTCGATCA CCTGTTCGAC
GAAACGTATG CGTTCAACGG TTTCAAACTG ACGGTCGACC TCGAGGCGCA AGTCGTGCGC
ACGTCGGACG GCGGCACCGA ATATCCGTTC GAAGTCGCGG CGTTCCGCAA GTACTGCCTG
CTGAACGGTT TCGACGACAT CGGCCTCACG CTGCGGCACG CGGACAAGAT TCGCCAGTTC
GAAGCAGAGC GTATTGCGAA GCAGCCTTGG CTGGCGCACC GCATCGTCGG CTAA
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| Protein sequence | MEKFIVHTGV VAPLDRENVD TDAIIPKQFL KSIKRTGFGP NAFDEWRYLD HGEPGQDNSK
RPLNPDFVLN QPRYQGASVL LARKNFGCGS SREHAPWALE QYGFRALIAP SFADIFYNNC
FKNGVLPIVL TEQQVDHLFD ETYAFNGFKL TVDLEAQVVR TSDGGTEYPF EVAAFRKYCL
LNGFDDIGLT LRHADKIRQF EAERIAKQPW LAHRIVG
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