| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6840 |
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| Symbol | trpA |
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| ID | 6279581 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 3189698 |
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| End bp | 3190510 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642617867 |
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| Product | tryptophan synthase subunit alpha |
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| Protein accession | YP_001890503 |
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| Protein GI | 187921471 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0159] Tryptophan synthase alpha chain |
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| TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.76658 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.863565 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCGTA TCAAGAACAC GTTTGCTGCG CTGTCCGCCC AAGGTAAGAA AGGACTCATT
CCGTTCATGA CGGCCGGCGA CCCGGACCCC GCGCGTACGG TTGAATTCAT GCATGCGCTC
GCCGCCGGCG GCGCCGATGT GATCGAACTC GGCGTGCCGT TTTCCGATCC GATGGCCGAT
GGTCCGGTGA TCCAGCAGTC GTCGGAACGC GCGTTGGCTC ATGGCGTGTC GCTGCGCCAC
GTGATCGCCG ACGTGAAGCG CTTCCGCGAG ACCAATGACA CCACGCCCGT CGTGCTGATG
GGCTACGCTA ATCCAATCGA GCGCATGGGT ACCGAAGCCT TCGCGAAGGC GGCGAAGGAA
GCTGGCGTGG ATGGTGTGCT GGTTGTCGAC TACCCGCCGG AAGAATGTGC TAACTTCGCT
GAACAGATGC AATCTGCTGG CATCGATCCG ATTTTCCTGC TGGCGCCCAC GTCTACCGAC
GAGCGTATTG CCGAGGTGGG CAAGATTGCC AGCGGCTACG TCTATTATGT GTCGTTGAAA
GGCGTGACCG GAGCGGCAAA TCTGGACGTT TCCAGCATCG CGAGTAAAAT CCCGGCCATC
AAGTCGCGCG TCCCCCTGCC GGTGGGCGTC GGTTTCGGTA TCCGCGACGC GCAAACCGCG
CGTTCGGTGG CCGAAGTGTC CGATGCCGTC GTGATCGGCA GCCGTATCGT GCAATTGCTC
GAACAGGCGG CGCCTGAAGC CGCTGCCGAG ACGCTGACGC GCTTTGTCGC CGAAGTGCGC
GAGGCGCTGG ATAGCGTCGC GACTGCCCGA TAA
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| Protein sequence | MSRIKNTFAA LSAQGKKGLI PFMTAGDPDP ARTVEFMHAL AAGGADVIEL GVPFSDPMAD
GPVIQQSSER ALAHGVSLRH VIADVKRFRE TNDTTPVVLM GYANPIERMG TEAFAKAAKE
AGVDGVLVVD YPPEECANFA EQMQSAGIDP IFLLAPTSTD ERIAEVGKIA SGYVYYVSLK
GVTGAANLDV SSIASKIPAI KSRVPLPVGV GFGIRDAQTA RSVAEVSDAV VIGSRIVQLL
EQAAPEAAAE TLTRFVAEVR EALDSVATAR
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