| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6824 |
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| Symbol | |
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| ID | 6278081 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 3168134 |
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| End bp | 3170353 |
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| Gene Length | 2220 bp |
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| Protein Length | 739 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642617852 |
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| Product | glycogen debranching enzyme GlgX |
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| Protein accession | YP_001890488 |
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| Protein GI | 187921456 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
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| TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.100045 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCATG CAATGCCCGA CCGGCTTCTG CCCGGTTCGC CCTATCCGCT CGGCGCTAGC
TGGGATGGCC TCGGCGTCAA CTTTGCAGTG TTCTCGGCGA ACGCGCAAAA AATCGAGCTT
TGCCTGTTCG ATCCCACCGG CCGCAAGGAA ATCCGCCGCT ACACGCTGCC CGAATGCACT
GACGAAGTCT GGCACGGCTA CCTGCCGAAT GCGCATCCGG GCACCGCCTA CGGGTTTCGC
GCGCACGGCC CGTATCAGCC GCAGCATGGG CATCGCTTCA ACCCGCACAA GCTGTTGCTC
GATCCGTATG CGCGCAAACT GGTCGGACAA TTTCGCTGGT CGGATGCGCT GTTCGGTTAT
CGCGTGCATT CGAATCGCGC GGACCTTTCC ATCGACCGGC GCGATTCGGC GCCGGCCATG
CCGAAGTGCG TGGTGATCGA TGAAGCGTTT GACTGGTCGC ACGATAAACG GCCGAACGTG
CCGTGGGGCG AAACCATTGT CTACGAGACG CATGTGCGCG GCGCCTCGAT GTTGCGCGCC
GATTTGCGTC AGCATGAACG CGGCACCTTC GCGGCGCTGT CTTCGCCGGA GTTCATCGAG
CATCTGCTGA AACTCGGCGT GACCGCGGTC GAACTGCTGC CCGTGCACGC GTTTCTCAAC
GACCGCTTTC TGGTGGAGCG CGGGCTGCGC AACTACTGGG GGTACAACAC GGCGGCATTT
TTCGCACCGG AGCCCTCGTA TCTGAGCACG CACCGGCTCG ACGAAATGCG CATCGCCGTG
CGTCAGTTGC ACGCGGCCGG CATCGAGGTG ATTCTCGACG TGGTCTACAA CCACACCTGC
GAAGGCAACG AAATGGGGCC GACCGTGTCG TGGCGCGGCC TCGACAACGC CAGCTATTAC
CGTCTGATTC CCGGCGACGA ACGTCACCAT ATCAACGACA CGGGTTGTGG CAACACCGTC
AATCTGCCGC ATCCGCGCGT GCTGCAAATG GTGATGGATT CACTGCGCTA CTGGTCGACC
GCGTTCAATA TCGACGGCTT CCGTTTCGAT CTGGGCGTCA CGCTCGGCCG CGAGCAGCAC
GGTTTCGATC CCGGTTCCGG TTTCTTCGAC GCGTTGCGCC AAGACCCGAT CCTGTCGCAG
CGCAAGCTGA TTTCCGAGCC TTGGGACATC GGTCCGGGCG GTTATCAGCT AGGCAATCAT
CCGCCGGGAT TCAGCGAATG GAACGACCGT TTTCGCGACA CGGTGCGACG TTTCTGGCGC
GGCGACGCCG GCTTGCGTCC CGACCTTGCC GCGCGGTTGA CCGGCTCGGC GGACCTCTTC
AACCGGCGCG CGAGAAAGCC GTGGGCATCG GTCAATTTTG TCACGTCGCA CGACGGTTTT
ACGTTAGCCG ATGTCACCGC TTACGAGCAG AAACACAACG AAGCCAATCG CGAAGACAAC
AACGACGGCC ACAATGAAAA CTGCAGCCGC AACTGGGGCG TGGAAGGCCC GACCGACGAC
CCCGCGATTC TCGCCACGCG AAAACGTGTG GCGCGCTCGC TGATCGCCAC GCTGCTGATG
GCGCTCGGCA CGCCCATGGT GCTGGCCGGC GACGAATCGC TGCGCACGCA GAACGGCAAC
AACAACGCCT ATTGCCAGGA CAACGAAATT TCGTGGATCG ACTGGGAACG GGCAAATTCG
CCGGACGGGC AGCAGATGAC CGCGTTCGTC GCGCGGGTGA TCGCGCTGCG CAAGCAACAT
CCGCTGCTGC GCGAAACGCG CTTTCTGTTC GGCGATCGTG AAGTGTTGCC GGGCCTGTTC
GATGTCGGCT GGTTCGACGA ACACGGCGAC CCGCTCACCA TTGAGGCCTG GCAGGACCCC
GAAGGCCGCG CGTTCACGCT GCGCCGCGCG GGTCCAGGTT TAAACGGCGA AACAGAAGTA
TTGTTGATGA TGCTTAACGC CAACGAAGAA ACACTGCGTT TTACGCCGCC CGCCCCGCAC
CTGGAATGGC ACGTGCTGTT AGACACTGCT GAGCCGGAGA GCGCGCCGCA TCGGCTGGCG
GTTGGGGAGG TCGAAGTGGC CGCCCATAGC CTGGTGATGC TGGCTGCGCA ACCGGTGGGC
GAAGCGGATT GGCAAGCGGG CTGGAAGGCC GGTGCGCAGC ACGGACCGCG GCTTCTGACT
GCGCTGCCGC CCGATCCGGG TGCGCATCCG CCCAGCAGCG ATACGTCGCC GACCACTTAG
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| Protein sequence | MSHAMPDRLL PGSPYPLGAS WDGLGVNFAV FSANAQKIEL CLFDPTGRKE IRRYTLPECT
DEVWHGYLPN AHPGTAYGFR AHGPYQPQHG HRFNPHKLLL DPYARKLVGQ FRWSDALFGY
RVHSNRADLS IDRRDSAPAM PKCVVIDEAF DWSHDKRPNV PWGETIVYET HVRGASMLRA
DLRQHERGTF AALSSPEFIE HLLKLGVTAV ELLPVHAFLN DRFLVERGLR NYWGYNTAAF
FAPEPSYLST HRLDEMRIAV RQLHAAGIEV ILDVVYNHTC EGNEMGPTVS WRGLDNASYY
RLIPGDERHH INDTGCGNTV NLPHPRVLQM VMDSLRYWST AFNIDGFRFD LGVTLGREQH
GFDPGSGFFD ALRQDPILSQ RKLISEPWDI GPGGYQLGNH PPGFSEWNDR FRDTVRRFWR
GDAGLRPDLA ARLTGSADLF NRRARKPWAS VNFVTSHDGF TLADVTAYEQ KHNEANREDN
NDGHNENCSR NWGVEGPTDD PAILATRKRV ARSLIATLLM ALGTPMVLAG DESLRTQNGN
NNAYCQDNEI SWIDWERANS PDGQQMTAFV ARVIALRKQH PLLRETRFLF GDREVLPGLF
DVGWFDEHGD PLTIEAWQDP EGRAFTLRRA GPGLNGETEV LLMMLNANEE TLRFTPPAPH
LEWHVLLDTA EPESAPHRLA VGEVEVAAHS LVMLAAQPVG EADWQAGWKA GAQHGPRLLT
ALPPDPGAHP PSSDTSPTT
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