Gene Bphyt_6822 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_6822 
Symbol 
ID6277876 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp3162356 
End bp3165820 
Gene Length3465 bp 
Protein Length1154 aa 
Translation table11 
GC content63% 
IMG OID642617850 
Producttrehalose synthase 
Protein accessionYP_001890486 
Protein GI187921454 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0366] Glycosidases
[COG3281] Uncharacterized protein, probably involved in trehalose biosynthesis 
TIGRFAM ID[TIGR02456] trehalose synthase
[TIGR02457] trehalose synthase-fused probable maltokinase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.615207 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGTG ACGACCCAGC TGAAACAACG ACACAATCAC CGGTGGGCAA TGCTCCTGGC 
AACACGGCCA AGCCGCGCAC CAATCGGCGC GGCAAACCCG CGGCCTTGAG CGACGATCCG
CTCTGGTACA AAGACGCGAT CATCTATCAG GTGCACATCA AGTCGTTCTT CGACGCGAAT
AACGACGGCG TCGGCGACTT TCCCGGCCTG ATCGCGAAGC TCGACTACAT TGCCGAACTC
GGTGTGAACG CGATCTGGCT GTTGCCGTTC TATCCGTCGC CACGACGCGA CGACGGTTAC
GACATCGCCG ACTATCGCAA CGTGCACCCG GACTACGGCA ACCTGTCCGA CGTGAAGCGC
TTCATTCAGG AAGCGCACGC ACGCGGCATT CGCGTGATTA CGGAGCTGGT GATCAACCAC
ACGTCGGATC AGCACCCGTG GTTTCAGCGC GCGCGCCGCG CGAAGCCCGG CTCGAATCAC
CGTAACTACT ACGTGTGGTC GGACACCGAT CAGAAGTACC AGGAAACGCG GATCATCTTC
ATCGACTCGG AGCCGTCCAA CTGGACGCAC GATCCGGTGG CGGGCGCGTA TTACTGGCAC
CGCTTCTACT CGCACCAGCC CGATCTGAAT TTCGACAATC CGGCCGTGCT GAAAGAAGTG
CTGCAGGTGA TGCGCTTTTG GCTCGATATG GGCATCGACG GGCTGCGGCT CGACGCGGTG
CCGTATCTGG TGGAACGTGA AGGCACGAAC AACGAGAACC TGCCGGAAAC GCACGCGGTT
CTGAAGAAAA TCCGCGCCAC CATCGACGCC GAATATCCGA ACCGGATGCT GCTCGCCGAA
GCCAACCAGT GGCCGGAAGA CGTGAAGGAA TATTTCGGCG ACGAAGACGA ATGCCACATG
GCGTTCCACT TCCCGCTGAT GCCGCGCATC TACATGTCGA TTGCGAGCGA AGACCGCTTC
CCGATCACCG ACATCATGCG GCAAACGCCG GATCTCGCCG CAACGAATCA ATGGGCGATT
TTCCTGCGCA ATCACGACGA GCTGACGCTG GAAATGGTCA CGGATTCCGA GCGCGACTAT
TTGTGGAACA CCTACGCAAG CGATCGCCGC GCGCGCCTGA ATCTCGGCAT TCGCCGTCGC
CTCGCGCCGC TCATGGAGCG CGACCGCCGC CGTATCGAGC TGATCAATTC GCTGCTGCTT
TCCATGCCCG GCACGCCCGT GATCTATTAC GGCGACGAAC TCGGCATGGG CGACAACATC
CACCTGGGCG ACCGCGACGG CGTGCGTACG CCGATGCAGT GGTCGTCGGA TCGCAACGGC
GGATTTTCGC GCGCCGACCC TGAGCAACTG GTGCTGCCGC CGGTTATGGG CTCGCTATAC
GGTTTCGACG CGGTGAACGT GGAAGCGCAG AGCCGCGACC CACACTCGCT GCTGAACTGG
ACCCGGCGCA TGCTCGCCAC GCGCCGCGCG AAACAGACTT TCGGACGCGG CACGATCCGC
TTCCTGAAAC CGGAAAACCG CAAGATTCTC GCGTATCTGC GCGAGATGCC AGGCGAACCG
CCGATCCTGT GCGTGGCGAA TCTTTCGCGT GCGCCGCAAG CGGTGGAGCT CGATCTGTCC
GAGTTCAACG GCTCAGTGCC GATCGAAATG ACTGCGGATT CCGTGTTCCC GGCCATCGGT
CAACTGACTT ATCTGCTGAC GTTCCCGCCG TACGGTTTTC TGTGGTTCAT GCTGTGCCCG
GGCGGCCAGC GTCCGACGTG GGCACAGGCT CATTCGGAAT CGCTGCCGGA ATTCGTCACG
ATCGTGATCC GCGAAGGCCA GGTCGGTCCG ACGCCGGAGA ACGTGCGTCT GCTCGAATCG
GAAGTGTTGC CTTCGTGGCT GAGCCGGCGC CGCTGGTTTG CGTCGAAGGA TCAGAAGCTC
AATGCGGTGC GGCTCGCGGC ATTGACCACG ATTCCGCACG GCGGCTTCGC CTTCACTGAA
ATCGAAGCGG ACGTAGGCGG TCATACCGAA CGCTACGTGG TGCCGATCGC GATTACGTGG
GGCGGCGAAA CCACTTTCCC GCTGTTCAAG CAACTGGCCT TCGCGCGCGT GCGGCGCGGC
CGCAACGTGG GGCATCTGAC GGACGCGTTT GCCTTGCCGA TCTTCGCGCA TGGCGTGATG
CGCAAGCTGC GCGAACGCGC CGTGGTGCCG ACCGTGCAGA AGAGCGAAAT CAAGTTTCTG
CCGACCGAGC GTTTCGCCGA ACTCGAAGGG CTCGGCGAAC GGCCGGAGAT TCGTTGGCTC
GCGGCCGAGC AAAGCAATAG TTCGTTGATC ATCGCCGACA CGGTCGTGCT GAAGCTGGTG
CGGCGCCTCG TAAGCGGTAT CCATCCGGAA GCCGAAATCA GCCGCTATCT GACGCAATTG
GGCTACGCGA ACACCGCGCC GCTGTATGGC GAAGTGGTGC GCGTCGATCC CGAAGGCGTG
CCGCACACCC TCTGTATCCT GCAAGGCTAT ATCGAGAATC AGGGCGACGC GTGGAACTGG
TCGCTCGACT ATCTGCGCCG CTCGGTGGAC GAACTCGCCA TCGCCGTCGA CACCGAAGCG
CAGTCGGCGC CGGACCGCAC CAATGAGGCA ATTCTGCTGG AAGGTTATAG CTCGTTGGCC
GGCACGATTG GCAGAAGGCT GGGCGAACTG CACGTGGCGC TCGCCTCGCC GACGGACGAC
CCGGCGTTCG CGCCGGAACC CGCCAGCGCG GAGCAGGTGA AGGCATGGGT GGACGGCACG
CAGGCGATGC TCGCCAGCGC GCTCGATCTG CTCGCGCCGC GCATCGAGCA GATGAGCGAT
CCGGAAACCA AAGCGCTGGC GCAAAGCCTC ATCGACCGCC GCAAGGAACT GGTGGCCGCC
GTCGACAATC TCGTTTCCGC CGACGCAGGC GCGCTACGCA TCCGCATTCA CGGCGACTTC
CATCTGGGCC AGGTGCTGGT CGCGCAGGGC GACGCATTTT TGATCGACTT CGAAGGCGAG
CCGGCACGCT CGCTTGAAGA ACGTCGTCAG AAATCGAGCC CGCTGCGTGA CGTGGCAGGT
CTGATGCGCT CGTTGTCGTA TGCGAGCGCG GCAGCGCAGT CCACCACGGA AGCCGCGCCG
CAACAGACCG CCGATCGCAA GCGCGCGCTG TTCGACCGTT TCCGCGCGCA TGCCACGGAA
ACGTTCCTCA GCGAGTACCG CGCAGCGGCA GCGGAAGCAG CAACACCGCT CGTCGCGCCC
GAAGCCGAAC AGGCCTTGCT CGATCTGTTC CTGATCGAAA AAGCCGCCTA CGAAATCCGT
TACGAAGCGG CCAACCGCCC GACGTGGCTC AGCTTGCCGG TACGCGGCCT CGCCGCGCTC
ACCAGCCGCT TGCTCGGCGA CACCGGCGCG CCAGGCCACG ATTCCCCAAC CCAGGCGCCA
GGCGCCGCCA CACCGCCTAA TCCGGCCGAG GGCGACTATG AGTGA
 
Protein sequence
MKRDDPAETT TQSPVGNAPG NTAKPRTNRR GKPAALSDDP LWYKDAIIYQ VHIKSFFDAN 
NDGVGDFPGL IAKLDYIAEL GVNAIWLLPF YPSPRRDDGY DIADYRNVHP DYGNLSDVKR
FIQEAHARGI RVITELVINH TSDQHPWFQR ARRAKPGSNH RNYYVWSDTD QKYQETRIIF
IDSEPSNWTH DPVAGAYYWH RFYSHQPDLN FDNPAVLKEV LQVMRFWLDM GIDGLRLDAV
PYLVEREGTN NENLPETHAV LKKIRATIDA EYPNRMLLAE ANQWPEDVKE YFGDEDECHM
AFHFPLMPRI YMSIASEDRF PITDIMRQTP DLAATNQWAI FLRNHDELTL EMVTDSERDY
LWNTYASDRR ARLNLGIRRR LAPLMERDRR RIELINSLLL SMPGTPVIYY GDELGMGDNI
HLGDRDGVRT PMQWSSDRNG GFSRADPEQL VLPPVMGSLY GFDAVNVEAQ SRDPHSLLNW
TRRMLATRRA KQTFGRGTIR FLKPENRKIL AYLREMPGEP PILCVANLSR APQAVELDLS
EFNGSVPIEM TADSVFPAIG QLTYLLTFPP YGFLWFMLCP GGQRPTWAQA HSESLPEFVT
IVIREGQVGP TPENVRLLES EVLPSWLSRR RWFASKDQKL NAVRLAALTT IPHGGFAFTE
IEADVGGHTE RYVVPIAITW GGETTFPLFK QLAFARVRRG RNVGHLTDAF ALPIFAHGVM
RKLRERAVVP TVQKSEIKFL PTERFAELEG LGERPEIRWL AAEQSNSSLI IADTVVLKLV
RRLVSGIHPE AEISRYLTQL GYANTAPLYG EVVRVDPEGV PHTLCILQGY IENQGDAWNW
SLDYLRRSVD ELAIAVDTEA QSAPDRTNEA ILLEGYSSLA GTIGRRLGEL HVALASPTDD
PAFAPEPASA EQVKAWVDGT QAMLASALDL LAPRIEQMSD PETKALAQSL IDRRKELVAA
VDNLVSADAG ALRIRIHGDF HLGQVLVAQG DAFLIDFEGE PARSLEERRQ KSSPLRDVAG
LMRSLSYASA AAQSTTEAAP QQTADRKRAL FDRFRAHATE TFLSEYRAAA AEAATPLVAP
EAEQALLDLF LIEKAAYEIR YEAANRPTWL SLPVRGLAAL TSRLLGDTGA PGHDSPTQAP
GAATPPNPAE GDYE