Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_6822 |
Symbol | |
ID | 6277876 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 3162356 |
End bp | 3165820 |
Gene Length | 3465 bp |
Protein Length | 1154 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642617850 |
Product | trehalose synthase |
Protein accession | YP_001890486 |
Protein GI | 187921454 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0366] Glycosidases [COG3281] Uncharacterized protein, probably involved in trehalose biosynthesis |
TIGRFAM ID | [TIGR02456] trehalose synthase [TIGR02457] trehalose synthase-fused probable maltokinase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.615207 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCGTG ACGACCCAGC TGAAACAACG ACACAATCAC CGGTGGGCAA TGCTCCTGGC AACACGGCCA AGCCGCGCAC CAATCGGCGC GGCAAACCCG CGGCCTTGAG CGACGATCCG CTCTGGTACA AAGACGCGAT CATCTATCAG GTGCACATCA AGTCGTTCTT CGACGCGAAT AACGACGGCG TCGGCGACTT TCCCGGCCTG ATCGCGAAGC TCGACTACAT TGCCGAACTC GGTGTGAACG CGATCTGGCT GTTGCCGTTC TATCCGTCGC CACGACGCGA CGACGGTTAC GACATCGCCG ACTATCGCAA CGTGCACCCG GACTACGGCA ACCTGTCCGA CGTGAAGCGC TTCATTCAGG AAGCGCACGC ACGCGGCATT CGCGTGATTA CGGAGCTGGT GATCAACCAC ACGTCGGATC AGCACCCGTG GTTTCAGCGC GCGCGCCGCG CGAAGCCCGG CTCGAATCAC CGTAACTACT ACGTGTGGTC GGACACCGAT CAGAAGTACC AGGAAACGCG GATCATCTTC ATCGACTCGG AGCCGTCCAA CTGGACGCAC GATCCGGTGG CGGGCGCGTA TTACTGGCAC CGCTTCTACT CGCACCAGCC CGATCTGAAT TTCGACAATC CGGCCGTGCT GAAAGAAGTG CTGCAGGTGA TGCGCTTTTG GCTCGATATG GGCATCGACG GGCTGCGGCT CGACGCGGTG CCGTATCTGG TGGAACGTGA AGGCACGAAC AACGAGAACC TGCCGGAAAC GCACGCGGTT CTGAAGAAAA TCCGCGCCAC CATCGACGCC GAATATCCGA ACCGGATGCT GCTCGCCGAA GCCAACCAGT GGCCGGAAGA CGTGAAGGAA TATTTCGGCG ACGAAGACGA ATGCCACATG GCGTTCCACT TCCCGCTGAT GCCGCGCATC TACATGTCGA TTGCGAGCGA AGACCGCTTC CCGATCACCG ACATCATGCG GCAAACGCCG GATCTCGCCG CAACGAATCA ATGGGCGATT TTCCTGCGCA ATCACGACGA GCTGACGCTG GAAATGGTCA CGGATTCCGA GCGCGACTAT TTGTGGAACA CCTACGCAAG CGATCGCCGC GCGCGCCTGA ATCTCGGCAT TCGCCGTCGC CTCGCGCCGC TCATGGAGCG CGACCGCCGC CGTATCGAGC TGATCAATTC GCTGCTGCTT TCCATGCCCG GCACGCCCGT GATCTATTAC GGCGACGAAC TCGGCATGGG CGACAACATC CACCTGGGCG ACCGCGACGG CGTGCGTACG CCGATGCAGT GGTCGTCGGA TCGCAACGGC GGATTTTCGC GCGCCGACCC TGAGCAACTG GTGCTGCCGC CGGTTATGGG CTCGCTATAC GGTTTCGACG CGGTGAACGT GGAAGCGCAG AGCCGCGACC CACACTCGCT GCTGAACTGG ACCCGGCGCA TGCTCGCCAC GCGCCGCGCG AAACAGACTT TCGGACGCGG CACGATCCGC TTCCTGAAAC CGGAAAACCG CAAGATTCTC GCGTATCTGC GCGAGATGCC AGGCGAACCG CCGATCCTGT GCGTGGCGAA TCTTTCGCGT GCGCCGCAAG CGGTGGAGCT CGATCTGTCC GAGTTCAACG GCTCAGTGCC GATCGAAATG ACTGCGGATT CCGTGTTCCC GGCCATCGGT CAACTGACTT ATCTGCTGAC GTTCCCGCCG TACGGTTTTC TGTGGTTCAT GCTGTGCCCG GGCGGCCAGC GTCCGACGTG GGCACAGGCT CATTCGGAAT CGCTGCCGGA ATTCGTCACG ATCGTGATCC GCGAAGGCCA GGTCGGTCCG ACGCCGGAGA ACGTGCGTCT GCTCGAATCG GAAGTGTTGC CTTCGTGGCT GAGCCGGCGC CGCTGGTTTG CGTCGAAGGA TCAGAAGCTC AATGCGGTGC GGCTCGCGGC ATTGACCACG ATTCCGCACG GCGGCTTCGC CTTCACTGAA ATCGAAGCGG ACGTAGGCGG TCATACCGAA CGCTACGTGG TGCCGATCGC GATTACGTGG GGCGGCGAAA CCACTTTCCC GCTGTTCAAG CAACTGGCCT TCGCGCGCGT GCGGCGCGGC CGCAACGTGG GGCATCTGAC GGACGCGTTT GCCTTGCCGA TCTTCGCGCA TGGCGTGATG CGCAAGCTGC GCGAACGCGC CGTGGTGCCG ACCGTGCAGA AGAGCGAAAT CAAGTTTCTG CCGACCGAGC GTTTCGCCGA ACTCGAAGGG CTCGGCGAAC GGCCGGAGAT TCGTTGGCTC GCGGCCGAGC AAAGCAATAG TTCGTTGATC ATCGCCGACA CGGTCGTGCT GAAGCTGGTG CGGCGCCTCG TAAGCGGTAT CCATCCGGAA GCCGAAATCA GCCGCTATCT GACGCAATTG GGCTACGCGA ACACCGCGCC GCTGTATGGC GAAGTGGTGC GCGTCGATCC CGAAGGCGTG CCGCACACCC TCTGTATCCT GCAAGGCTAT ATCGAGAATC AGGGCGACGC GTGGAACTGG TCGCTCGACT ATCTGCGCCG CTCGGTGGAC GAACTCGCCA TCGCCGTCGA CACCGAAGCG CAGTCGGCGC CGGACCGCAC CAATGAGGCA ATTCTGCTGG AAGGTTATAG CTCGTTGGCC GGCACGATTG GCAGAAGGCT GGGCGAACTG CACGTGGCGC TCGCCTCGCC GACGGACGAC CCGGCGTTCG CGCCGGAACC CGCCAGCGCG GAGCAGGTGA AGGCATGGGT GGACGGCACG CAGGCGATGC TCGCCAGCGC GCTCGATCTG CTCGCGCCGC GCATCGAGCA GATGAGCGAT CCGGAAACCA AAGCGCTGGC GCAAAGCCTC ATCGACCGCC GCAAGGAACT GGTGGCCGCC GTCGACAATC TCGTTTCCGC CGACGCAGGC GCGCTACGCA TCCGCATTCA CGGCGACTTC CATCTGGGCC AGGTGCTGGT CGCGCAGGGC GACGCATTTT TGATCGACTT CGAAGGCGAG CCGGCACGCT CGCTTGAAGA ACGTCGTCAG AAATCGAGCC CGCTGCGTGA CGTGGCAGGT CTGATGCGCT CGTTGTCGTA TGCGAGCGCG GCAGCGCAGT CCACCACGGA AGCCGCGCCG CAACAGACCG CCGATCGCAA GCGCGCGCTG TTCGACCGTT TCCGCGCGCA TGCCACGGAA ACGTTCCTCA GCGAGTACCG CGCAGCGGCA GCGGAAGCAG CAACACCGCT CGTCGCGCCC GAAGCCGAAC AGGCCTTGCT CGATCTGTTC CTGATCGAAA AAGCCGCCTA CGAAATCCGT TACGAAGCGG CCAACCGCCC GACGTGGCTC AGCTTGCCGG TACGCGGCCT CGCCGCGCTC ACCAGCCGCT TGCTCGGCGA CACCGGCGCG CCAGGCCACG ATTCCCCAAC CCAGGCGCCA GGCGCCGCCA CACCGCCTAA TCCGGCCGAG GGCGACTATG AGTGA
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Protein sequence | MKRDDPAETT TQSPVGNAPG NTAKPRTNRR GKPAALSDDP LWYKDAIIYQ VHIKSFFDAN NDGVGDFPGL IAKLDYIAEL GVNAIWLLPF YPSPRRDDGY DIADYRNVHP DYGNLSDVKR FIQEAHARGI RVITELVINH TSDQHPWFQR ARRAKPGSNH RNYYVWSDTD QKYQETRIIF IDSEPSNWTH DPVAGAYYWH RFYSHQPDLN FDNPAVLKEV LQVMRFWLDM GIDGLRLDAV PYLVEREGTN NENLPETHAV LKKIRATIDA EYPNRMLLAE ANQWPEDVKE YFGDEDECHM AFHFPLMPRI YMSIASEDRF PITDIMRQTP DLAATNQWAI FLRNHDELTL EMVTDSERDY LWNTYASDRR ARLNLGIRRR LAPLMERDRR RIELINSLLL SMPGTPVIYY GDELGMGDNI HLGDRDGVRT PMQWSSDRNG GFSRADPEQL VLPPVMGSLY GFDAVNVEAQ SRDPHSLLNW TRRMLATRRA KQTFGRGTIR FLKPENRKIL AYLREMPGEP PILCVANLSR APQAVELDLS EFNGSVPIEM TADSVFPAIG QLTYLLTFPP YGFLWFMLCP GGQRPTWAQA HSESLPEFVT IVIREGQVGP TPENVRLLES EVLPSWLSRR RWFASKDQKL NAVRLAALTT IPHGGFAFTE IEADVGGHTE RYVVPIAITW GGETTFPLFK QLAFARVRRG RNVGHLTDAF ALPIFAHGVM RKLRERAVVP TVQKSEIKFL PTERFAELEG LGERPEIRWL AAEQSNSSLI IADTVVLKLV RRLVSGIHPE AEISRYLTQL GYANTAPLYG EVVRVDPEGV PHTLCILQGY IENQGDAWNW SLDYLRRSVD ELAIAVDTEA QSAPDRTNEA ILLEGYSSLA GTIGRRLGEL HVALASPTDD PAFAPEPASA EQVKAWVDGT QAMLASALDL LAPRIEQMSD PETKALAQSL IDRRKELVAA VDNLVSADAG ALRIRIHGDF HLGQVLVAQG DAFLIDFEGE PARSLEERRQ KSSPLRDVAG LMRSLSYASA AAQSTTEAAP QQTADRKRAL FDRFRAHATE TFLSEYRAAA AEAATPLVAP EAEQALLDLF LIEKAAYEIR YEAANRPTWL SLPVRGLAAL TSRLLGDTGA PGHDSPTQAP GAATPPNPAE GDYE
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