| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6821 |
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| Symbol | |
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| ID | 6278027 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 3158904 |
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| End bp | 3162359 |
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| Gene Length | 3456 bp |
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| Protein Length | 1151 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642617849 |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_001890485 |
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| Protein GI | 187921453 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.137668 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.518409 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACCTC GAAACGGGTA CGCGCCGCGG ATTTACTTTT TTCATTCACT TCTGGTTGGG
CCGCTCGATG CGTGGCCTGC GCAGTTCGCG CATGCAACCG CGCTGGGCTT CGATCACGCG
CTGATCGGCA GCCTCTTCGA GCCGGGACAG GCCGGCCACG GACAGGTGGT CGGCAACCAC
GCCCGCCTGC ATCCGGTGTT CGAAGCCGGG CAGCAATCCG CTACCGAGGC GATTCGCACG
CTTGCCAACG CGGCGAAGCA GAACGGCCTG ACCTTGCTGG CCGATCTGGT GATCGACCGG
ATGGCCGCCG ATGGGACGCT GTACGCCGAA CATGCCGACT GGTTTCATCC CTTCGAATCT
GAAGAAGCGC GGCTCGATCC GCGCCATGTG CATCGCGAGG ACAACGTCGC GTATGCGAAC
TTCAACGAGG CTGGCAGCAG CGCTGCGCTA GTCGGCTGGT GGACGCAGCA ACTGCTGGCG
CTGGCGGAGG CCGGCGTGGG CGGGTTTCGC TTCGATTCGC CGCATCGCGT GCCAGCTGCC
GTCTGGCGGC AATTGAGCGA CGCGGTCCGC GCGCAGCATC CCGAGGTCCG TTTTCTCGCC
GCCACGCCCG GCCTCGCGCG TGACGATCTG CTCGGCCTGC AAGGCGCCGG CTTCGATAGC
GTGTTCTCGT CGGTGCGCTG GTGGGACTTC CGCGCAAGCT GGATGGTCGA GGAACATGCC
GCGCTCGCGC GTATCGCCGC GCCCATCGGC TTTCCTGAAG CGCCATACGG CACCCGCCTT
GCCGCCGAGC TGACCGATGT ACACGACGCC GCCATCGTCG AGCGGGCTTA CCGGCGCGCG
CTGTTTACAT CGGCTTCGAT CGGCACGGGC TGGATGATGC CGATGGGTTT CGAGTACGGT
ATTGCCGAGC CGATGTCGCA AACACGCGGC GACGCTGCGC AGTTCGCCCT CGCCGCTCAA
GCCAAAAAGT TCGATCTCAC GGAAGCCATC ACGCACGTGA ACCTGGTGGC GAGTAAAACC
AGAACGCTGC ACGCCAATGG GGAATTGCGC CCGCTCAGCG GTCCCGGCGC ACCGGCGGCG
GTGTTGCTGC GCGCCGACCA GCCCGACCTG CGCGATGCCG ACGAAGCGAT CCTCATCGCG
ATCAATCCCG AACTCGGTGC GCCGGTACGC GTCGATCCCG CGCGCTTCCT CGCAGGCGTG
CCCGGCAACT TCACGCGCTT CGTGCCGCTC GACGCGCCCG GCAACGCCTC GCCCGCCACG
CTCACGTTAT TCTCACTTGC GCCTGGCGCG GTCCGCCTGC TCCGCGCCGT CACGGAAAAG
CCGATCCGTC TCGCGCCGCC CATCGACAAG CCGAACAGCA AGCGCAGCGG CCGCAAGACC
GTGATCGAGG CGCTGAGCGC GCCGCGCGTG GCCATCGAGA GCGTGACGCC TTCGGTCGAT
AACGGCCGCT TCGCGGCCAA GCGCAGCGTG GGCGAACGCG CCGAAATCAC CGCCGCGATC
TTCGCCGAAG GTCATGACAA GATCGCCGCC GCCGTGATCT GGCGCGCCGC CGACGAAACC
GCGTGGCACG AAGTGCCGAT GGAGCCGGCG CAACCCGCCG GCCTCGACAT CTGGAAGGCG
CGCATTCCGC TCGACCGCAT GGGCCGTCAC GAATTTACCG TGATCGCGTG GCGCGACGAC
TTCGCTTCGC TGGTCGAGCA CGTGCAGAAG AAGCTGAAGG CGGGACAAAC CGTCGAACTC
GAACTCGACG AAGCGTCGCA TCTGTTCGCG CTGGTGCTCG CCGAGGTCGA AACCACGGAA
GGCGCGCACA TTGAACCGCT CGAACATATC GTCAAACTTT TCACCAAGGC CGACGCGGAA
ACCAAGCTCG CGCTGCTGCT CTCGCCGACT ACGGCGAAGG CGATGACCGC CGCGCGCCAT
CGGCCATTCC TGAGCCGCGA TCCAGTCATC TACAAGATCG ACGCTGACCG CACCGCCGCG
CGCTTCGCAA GCTGGTACGA GATCTTCCCG CGCTCGATGA GCGATGACGA ATCGCGCCAC
GGCACGTTCG CCGATGTCAT GACCAAGCTG CCGCGCATTC GCGACATGGG CTTCGACGTG
CTGTATTTCC CGCCGATTCA CCCCATCGGC GTGGCGAACC GCAAAGGCCG CAACAACACG
CTGACCGCGC AGCCGGGCGA TGTCGGCAGC CCGTATGCGA TCGGTGGGGT CGAAGGCGGC
CATACGGCCG TGCATCCGCA ACTCGGCACG CTCGACGATT TCAAGGCCAT GCTCGCCGCC
GCACACGCGC ACGGCCTGGA AATCGCGCTC GACTTCGCCG TGCAATGTTC GCCGGATCAC
CCGTGGCTGA AGGAGCATCC GACGTGGTTC GCGTGGCGCC CCGACGGCAC GCTGCGCTAC
GCAGAAAATC CGCCGAAGAA GTATCAGGAC ATCGTCAATC CCGACTTTTA CGCGCACGAC
GCCAAACCCG ATTTGTGGCT CGCGCTGCGC GACGTCTTCC TGTTCTGGAT CGAAGCGGGC
GTGCATATTT TCCGCATCGA CAATCCGCAC ACCAAGCCGC TGCCGTTCTG GGAGTGGGTG
ATCGCCGATG TGCGGGCGCG CTATCCCGAC ACGATCTTTC TCGCCGAAGC CTTCACGCGG
CCGCGCATGA TGAACCGGCT CGGCAAGATC GGTTTCTCGC AGTCGTACAC ATACTTCACG
TGGCGGGAAT CCAAGCGCGA TTTCATCGAG TACATGACCG AGCTTACGCA GACCAGCGCG
CGTGATTCCT ACCGGCCTAA CTTTTTCGTC AATACGCCGG ATATCAACCC GCGGCATCTG
CAATCGCAGG GACGCACGGG CTTTCTGATT CGCGCCGCAC TCGCTTCGAC GCTGGCTGGA
TTGTGGGGCG TGTATAGTGG TTTCGAGCTA TGCGAGGCCG CCGCGCTGCC GAACAGCGAG
GAATATCTCG ACTCCGAGAA GTACCAGTTG CGCGCGTGGG ACTGGAACCG GCCCGGCAAC
ATCACCGGCG AGATTACTGC GCTGAACCGC ATTCGCCGCG CGAACCCGGC ACTGCAAACG
CATCTCGGCC TGACATTCCT GCCCGCGCAC AACGACCACA TCCTGTTCTT CGAAAAGGCG
ACCGAATCGC GCGACAACGT GATCCTCGTC GCGATCAATC TGGACCCGTT CAACGAACAG
GGCGCGGATA TCGAATTGTC GTGGGAGACT TTCCAGAAAT GGAATCTGCA CGATCATGGC
CCGCTGGAAG TCACCGACCA GATGACCGGC GCCCGCTTCG AATGGCACGG CCGCTGGCAG
CACGTCCAGC TCGGGTCGGG CCAGCCGTTC TCGATCTGGC GCATCGCGCC GCTCGGCGGC
CTGCCCGCAG ACCGGCCGGA TGAAGCCGAC AGCGACTCCG ACAGCGTTCA TCACGCAGAC
GCTGGCAACC CAACCTCAAC GGAAGGTGCG ACATGA
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| Protein sequence | MEPRNGYAPR IYFFHSLLVG PLDAWPAQFA HATALGFDHA LIGSLFEPGQ AGHGQVVGNH
ARLHPVFEAG QQSATEAIRT LANAAKQNGL TLLADLVIDR MAADGTLYAE HADWFHPFES
EEARLDPRHV HREDNVAYAN FNEAGSSAAL VGWWTQQLLA LAEAGVGGFR FDSPHRVPAA
VWRQLSDAVR AQHPEVRFLA ATPGLARDDL LGLQGAGFDS VFSSVRWWDF RASWMVEEHA
ALARIAAPIG FPEAPYGTRL AAELTDVHDA AIVERAYRRA LFTSASIGTG WMMPMGFEYG
IAEPMSQTRG DAAQFALAAQ AKKFDLTEAI THVNLVASKT RTLHANGELR PLSGPGAPAA
VLLRADQPDL RDADEAILIA INPELGAPVR VDPARFLAGV PGNFTRFVPL DAPGNASPAT
LTLFSLAPGA VRLLRAVTEK PIRLAPPIDK PNSKRSGRKT VIEALSAPRV AIESVTPSVD
NGRFAAKRSV GERAEITAAI FAEGHDKIAA AVIWRAADET AWHEVPMEPA QPAGLDIWKA
RIPLDRMGRH EFTVIAWRDD FASLVEHVQK KLKAGQTVEL ELDEASHLFA LVLAEVETTE
GAHIEPLEHI VKLFTKADAE TKLALLLSPT TAKAMTAARH RPFLSRDPVI YKIDADRTAA
RFASWYEIFP RSMSDDESRH GTFADVMTKL PRIRDMGFDV LYFPPIHPIG VANRKGRNNT
LTAQPGDVGS PYAIGGVEGG HTAVHPQLGT LDDFKAMLAA AHAHGLEIAL DFAVQCSPDH
PWLKEHPTWF AWRPDGTLRY AENPPKKYQD IVNPDFYAHD AKPDLWLALR DVFLFWIEAG
VHIFRIDNPH TKPLPFWEWV IADVRARYPD TIFLAEAFTR PRMMNRLGKI GFSQSYTYFT
WRESKRDFIE YMTELTQTSA RDSYRPNFFV NTPDINPRHL QSQGRTGFLI RAALASTLAG
LWGVYSGFEL CEAAALPNSE EYLDSEKYQL RAWDWNRPGN ITGEITALNR IRRANPALQT
HLGLTFLPAH NDHILFFEKA TESRDNVILV AINLDPFNEQ GADIELSWET FQKWNLHDHG
PLEVTDQMTG ARFEWHGRWQ HVQLGSGQPF SIWRIAPLGG LPADRPDEAD SDSDSVHHAD
AGNPTSTEGA T
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