Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_6818 |
Symbol | |
ID | 6278160 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 3155111 |
End bp | 3156712 |
Gene Length | 1602 bp |
Protein Length | 533 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642617846 |
Product | glucose-methanol-choline oxidoreductase |
Protein accession | YP_001890482 |
Protein GI | 187921450 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.242551 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAACA AAAATTCCGC CGACATCGTC GTGGTCGGTT CGGGCGTGGC GGGCGGACTG GTCGCGCATC AGATGGCGCT CGCCGGCGCG TCGGTGATTC TGCTCGAAGC CGGGCCGCGC ATTCCGCGTT GGCAAATCGT GGAGAACTTC CGCAACTCGC CGGTCAAGTC GGACTTCGCG ACGCCGTATC CGTCGACGCC GTACGCGCCG CATCCCGAGT ACGCGCCCGC CAACAATTAT CTGATCCAGA AAGGCGACTA TCCGTATAGC TCGCAGTACC TACGGCTGGT GGGCGGCACG ACATGGCACT GGGCGGCGGC CGCATGGCGG CTGTTGCCGT CGGACTTCCA GTTGCACAAG CTGTACGGCG TGGGACGCGA CTGGCCGTAT CCGTACGAAA CGCTGGAGCC CTGGTATTCG GCCGCTGAAG TGCAACTCGG CGTGTCGGGC CCGGGCAATT CGATCGATCT CGGTTCGCCG CGCTCGAAAC CTTATCCGAT GAACCCGCTT CCGCTTTCGT ACATGGATCA GCGATTCAGC GACGTGCTCA ACGCGCAAGG CTTCAAGGTC GTGCCCGAGC CGGTGGCGCG CAACAGCCGT CCGTACGATG CGCGGCCTAC CTGCTGCGGC AATAACAACT GCATGCCGAT CTGCCCGATT GCCGCGATGT ACAACGGCGT CGTGCATGCG GAAAAAGCCG AACAGGCCGG CGCGAAACTG ATTCCGGAAG CCGTGGTGTA TCGCGTCGAA GCGGACAACA AAGGGTTGAT CACGGCGGTC CATTACAAGG ACCCGAACGG CAACAGCACG CGCGTAACCG GCAAACTGTT CGTGCTTGCC GCGAACGGCA TCGAAACGCC GAAGCTGATG CTGATGTCGA CATCCGATAA ATTCCCGCAT GGCGTCGGCA ACAGTTCCGA TCAGGTGGGC CGCAACCTGA TGGATCATCC GGGCACGGGT GTTACGTTCC TCGCCAATGA AGCGCTGTGG CCCGGACGCG GACCGATGGA GATGACCTCG ATCGTCAACT TCCGCGATGG CGCGTTCCGT TCGGACTACG CCGCAAAGAA ACTGCATCTC TCGAACGGCG TGCCGACCAT GAGCGTGACC GCCGACCTGT TGAAAAAAGG CCTGACCGGC GCCGAACTCG ACCGGCAGAT ACGCGACCGC GCGGCACGCA CGCTGAACAT CAACAGTTTC CACGAGCATC TGGCCGAGCC GCAGAACCGC GTGGTGCCGT CGGCGGACCA CAAGGATTCG CTCGGCATTC CGCAGCCGGA AATCTATTAC TCGATCAACG ATTACGTAAA GAAAAGCGCG GCCAACACGC ACGAGTTGTA TGCGCAGATC GCCGCGCTGT TCGGCGGCGC CGAGGTCACT TTCGACGACA CCTTCGCGCC GAACAATCAC ATCATGGGCA CCACGATCAT GGGCAGCGAT CCGGCGGATT CGGTCGTCGA TGCGGACTGC CGCACGCATG ACCACTCCAA TCTGTTCATC GCCAGCAGCG GCGTGATGCC GACCGCGGCA TCGGTGAATT GCACGCTGAC GATCGCGGCC TTGTCGCTGA AGCTGGCCGA CAAGCTCAAG CGTGAAATCT GA
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Protein sequence | MANKNSADIV VVGSGVAGGL VAHQMALAGA SVILLEAGPR IPRWQIVENF RNSPVKSDFA TPYPSTPYAP HPEYAPANNY LIQKGDYPYS SQYLRLVGGT TWHWAAAAWR LLPSDFQLHK LYGVGRDWPY PYETLEPWYS AAEVQLGVSG PGNSIDLGSP RSKPYPMNPL PLSYMDQRFS DVLNAQGFKV VPEPVARNSR PYDARPTCCG NNNCMPICPI AAMYNGVVHA EKAEQAGAKL IPEAVVYRVE ADNKGLITAV HYKDPNGNST RVTGKLFVLA ANGIETPKLM LMSTSDKFPH GVGNSSDQVG RNLMDHPGTG VTFLANEALW PGRGPMEMTS IVNFRDGAFR SDYAAKKLHL SNGVPTMSVT ADLLKKGLTG AELDRQIRDR AARTLNINSF HEHLAEPQNR VVPSADHKDS LGIPQPEIYY SINDYVKKSA ANTHELYAQI AALFGGAEVT FDDTFAPNNH IMGTTIMGSD PADSVVDADC RTHDHSNLFI ASSGVMPTAA SVNCTLTIAA LSLKLADKLK REI
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