| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6808 |
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| Symbol | |
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| ID | 6280009 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 3144440 |
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| End bp | 3145234 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642617837 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001890473 |
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| Protein GI | 187921441 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.000274382 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAACATCG ATCTATCGGG CAAGACCGCT ATCGTCAGTG CATCCACGGC GGGCATCGGC
CTTGCTATCG CCACCGGCAT TGCCGCGGCC GGCGCGCAGA CCATCATCAA CGGACGCAAG
CAGGAGGCGG TGGACCGCGC GATCGACACG ATCCGCAAGA CCGTGCCGCA AGCGAAATTG
CAAGGCTTCG CGGGCGACCT CGGCACGTCG GAAGGTTGCG ACGCGCTGGC GAAAGCCGTG
CCGCAGGCGG ATATTCTAGT GAACAACCTC GGCGTCTTCG GACCCGGCGA CATCTTCAGC
ACCACAGACG ACGACTGGGA ACGCTACTTC CAGGTCAACG TGATGTCGGG CGTACGTCTC
ACGCGCCACT ACCTCAAAGG AATGATGGAG CGCAAATGGG GCCGCGTGGT GTTCATCTCG
TCCGAATCCG GATTGAATAT TCCGCCGGAT ATGCTCGCTT ATGGTTTCTC GAAGACGGCG
CAACTGAGCA TTGCGCGCGG CATCGCCAAA CAGGCGGCCG GCAGCGGCGT GACGGTGAAT
GCCGTGCTGC CCGGACCGAC CTTATCCGAC GGCCTCCGTT CGATGGTCGA AGAAACCGCT
AAAGAGCATG GCAAAACCGT CGAGCAGGTC GCCACGGAGT TCGTCCGCGA GCATCGAAGC
AGTTCGATCA TTCAACGCGC CGCCACCACC GAGGAAGTGG CGAACATGGT CGTCTATGTC
TGCTCGCCGC AGGCCTCGGC GACGACTGGT GCGGCGCTGC GCGTGGACGG CGGCGTGGTC
GATACGATTG CTTAA
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| Protein sequence | MNIDLSGKTA IVSASTAGIG LAIATGIAAA GAQTIINGRK QEAVDRAIDT IRKTVPQAKL
QGFAGDLGTS EGCDALAKAV PQADILVNNL GVFGPGDIFS TTDDDWERYF QVNVMSGVRL
TRHYLKGMME RKWGRVVFIS SESGLNIPPD MLAYGFSKTA QLSIARGIAK QAAGSGVTVN
AVLPGPTLSD GLRSMVEETA KEHGKTVEQV ATEFVREHRS SSIIQRAATT EEVANMVVYV
CSPQASATTG AALRVDGGVV DTIA
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