| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6787 |
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| Symbol | |
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| ID | 6278252 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 3123570 |
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| End bp | 3124919 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642617816 |
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| Product | NADH dehydrogenase |
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| Protein accession | YP_001890452 |
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| Protein GI | 187921420 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1252] NADH dehydrogenase, FAD-containing subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0000879358 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.00000494045 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCATCGTT TTATCGTCGT TGGCGGAGGC GCGGGGGGAT TGGAGCTGGC GACGCGTTTG
GGCGATCGCT ATGCACCCCA CAAGAACAAG GGCGGTGTGC AGGCGCAGGT CACGCTCGTC
GACCGCAACC CCACTCATAT CTGGAAGCCG CTGCTGCATG AAGTGGCGGC GGGCAGCATG
GACCCGTTCA CGCAGGAACT CGAGTATGCG GCGCAAGCGC GTTGGCACGG CTTCGAATTT
CAGCAGGGCG ACCTGACGGG GCTGGACCGC GCGAATAAGC GCCTCACGCT CGGCACCGTG
CTCGACGACG ACGGCGCCGA GTTGCTGCCC GAACGCCAGC TCGAATACGA CACGCTGATC
ATCGCGATCG GCAGCACGAC CGCCTTCTTC GGCGTCAAAG GCGCGCCTGA ATTTTCCCTC
GCACTCGACA CCGTGAGCCA GGCCGAGCGT TTTCGCAAAC GTCTGATCGC GGCCTGCATG
CGCGCGGAGC ATCAGGTGCA TGAACCGGTC GAGGCAGCGC CGGCCGTTGG CGCGCCCGGC
GAGCCGCGCA TTCAGGTGGC GATTGTCGGC GGCGGCGCGA CGGGCGTGGA ACTGTCGGCG
GAATTGCGCA ACACGGCGCA GGTGCTGTCC GCCTACGGTC TGCACAAGCT CGATCCGCGG
CATGACGTCG GCATCGTGCT GATCGAAGCA GGGCCGCGGA TTCTGCCGGC TTTGCAGGAG
CGCGTTTCGA CCGCCACGGC CGAACTGCTC ACCAAGCTCG GCGTGAAGCT GATGATCGGC
GAGACCGTGG CCGAAGTCGC GCCCGGCATG ATCCGCACTG CCAGCGGCAA AACCGTGCGC
GCCGATCTGA CGGTGTGGGC GGCCGGCATC AAGGCGCCGG CGATTCTGAG CGAGCTCGAC
GGCCTGCCTG TCAATCGGCT GGGCCAGCTC ATCGTGCGTC GCACGCTGCA AACCGAAACC
GACGATAACG TCTTCGCGCT CGGCGATTGC GCGGCGTGCC CGTGGCCGGG CAACGAGCGC
AACGTGCCGC CGCGCGCGCA GGCGGCTCAC CAGCAAGCGA GCTTCCTGAT GAAGGCGCTG
GCAGCGCGGC TCGAAAACAA GCCGCTGCCG GAGTTTACCT ATCGCGACTT CGGGTCGCTG
GTGTCGCTCG GGCATTTCAG CGCGGTTGGT AATCTGATGG GCGGGGTGAT CGGCGGCAAC
ATGCTGATCG AAGGGCTGTT CGCGCGCTTC ATGTACATGT CGCTGTACCG GCTGCATATC
GCCGCGCTGC ACGGCTACGC GCGGATGGTG CTCGACACCT TTGCCCACTG GTTGCGCCGT
ACCACGCTAC CGCGGGTCAA GCTGCACTGA
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| Protein sequence | MHRFIVVGGG AGGLELATRL GDRYAPHKNK GGVQAQVTLV DRNPTHIWKP LLHEVAAGSM
DPFTQELEYA AQARWHGFEF QQGDLTGLDR ANKRLTLGTV LDDDGAELLP ERQLEYDTLI
IAIGSTTAFF GVKGAPEFSL ALDTVSQAER FRKRLIAACM RAEHQVHEPV EAAPAVGAPG
EPRIQVAIVG GGATGVELSA ELRNTAQVLS AYGLHKLDPR HDVGIVLIEA GPRILPALQE
RVSTATAELL TKLGVKLMIG ETVAEVAPGM IRTASGKTVR ADLTVWAAGI KAPAILSELD
GLPVNRLGQL IVRRTLQTET DDNVFALGDC AACPWPGNER NVPPRAQAAH QQASFLMKAL
AARLENKPLP EFTYRDFGSL VSLGHFSAVG NLMGGVIGGN MLIEGLFARF MYMSLYRLHI
AALHGYARMV LDTFAHWLRR TTLPRVKLH
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