| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6779 |
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| Symbol | |
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| ID | 6278881 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 3114530 |
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| End bp | 3115681 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642617808 |
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| Product | putative DNA-binding/iron metalloprotein/AP endonuclease |
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| Protein accession | YP_001890444 |
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| Protein GI | 187921412 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0533] Metal-dependent proteases with possible chaperone activity |
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| TIGRFAM ID | [TIGR00329] metallohydrolase, glycoprotease/Kae1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.00246357 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGGGCCGC ATTGTACCCG CGCGTCGGCG GCGCCTTGCC CGCACTGCTA TACTTTCATG
CTTGCCTTCT CACTTTCGGG CGCTGGAGTT TTATCGCTTC TGCGTCCGCT CAAGCCCACC
ATCATGCTCG TTCTCGGCAT CGAAAGCTCC TGCGACGAAA CCGGTCTCGC GCTCTACGAC
ACGGAGCGCG GCCTGCTCGC GCACGCGCTG CATTCGCAAA TTGCGATGCA TCGGGAGTAC
GGCGGCGTGG TGCCGGAACT GGCGTCGCGC GATCACATCC GGCGCGCGCT GCCGCTGCTC
GAAGAGGTGA TGGAACGCGC CGGCGCGGCC CGTGGCGACA TCGACGCGAT CGCCTACACG
CAAGGCCCTG GTCTCGCGGG CGCGCTGCTG GTCGGCGCGA GCGTCGCCAA CTCGCTGGCC
ATGGCGTGGG ACAAGCCGAC CATCGGCATT CATCACCTTG AAGGGCATTT GCTGTCGCCG
CTGCTGGTGG ATGAGCCACC GCCGTTCCCG TTTGTCGCGC TACTGGTATC CGGTGGGCAC
ACGCAGTTGA TGCGTGTCAC GGACGTGGGC GTCTACGAGA CGCTCGGCGA AACGCTGGAC
GACGCCGCCG GCGAAGCGTT CGACAAAACC GCCAAACTGT TAGGCCTGGG TTACCCGGGC
GGCCCGGAAG TCTCGCGCAT GGCCGAATTC GGCACGCCGG GCGCGGTGGT CCTGCCGCGT
CCCATGCTGC ATTCCGGCGA CCTCGATTTC AGCTTCAGCG GCTTGAAGAC CGCTGTTCTC
ACGCACGCCA AGAAGCTCGG CGGCGCCAAT ATCTGCGAGC AGGCGAAAGC CGATCTGGCG
CGCGGTTTCG TCGACGCGGC AGTCGACGTT CTGGCTGCGA AGTCGCTGGC CGCGCTCAAG
AAGACCGAGC TCAACCGGTT GGTCGTCGCG GGCGGTGTCG GCGCAAACCG GCAGTTGCGC
GAAGCGCTGT CCGCTGCCGC CAAGAAGCGC AATTTCTACG TGCACTACCC GGACCTGTCG
CTGTGCACGG ACAACGGCGC GATGATCGCG CTGGCCGGCG CGTTGCGACT GCAGCGCTGG
CCGGATCAGT CGGGCAAGGA CTACGCGTTC ACGGTGAGGC CGCGCTGGGA TCTGACATCC
CTCGCACGCT GA
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| Protein sequence | MGPHCTRASA APCPHCYTFM LAFSLSGAGV LSLLRPLKPT IMLVLGIESS CDETGLALYD
TERGLLAHAL HSQIAMHREY GGVVPELASR DHIRRALPLL EEVMERAGAA RGDIDAIAYT
QGPGLAGALL VGASVANSLA MAWDKPTIGI HHLEGHLLSP LLVDEPPPFP FVALLVSGGH
TQLMRVTDVG VYETLGETLD DAAGEAFDKT AKLLGLGYPG GPEVSRMAEF GTPGAVVLPR
PMLHSGDLDF SFSGLKTAVL THAKKLGGAN ICEQAKADLA RGFVDAAVDV LAAKSLAALK
KTELNRLVVA GGVGANRQLR EALSAAAKKR NFYVHYPDLS LCTDNGAMIA LAGALRLQRW
PDQSGKDYAF TVRPRWDLTS LAR
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