| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6772 |
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| Symbol | |
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| ID | 6280207 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 3104579 |
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| End bp | 3105712 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642617800 |
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| Product | porin Gram-negative type |
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| Protein accession | YP_001890437 |
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| Protein GI | 187921405 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00264492 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.103826 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGA GTCTCATCGT CGTTGCGGTT GCCGCATCGT TCGCCTCCGT CGCTCACGCA
CAAAGCAGCG TGACTCTGTA TGGTCTGCTG GACGCGGGCC TGACGTACAC CAGCAACGTC
AACCACAACG CAAAGTGGGC AGCCGGTAGC GGCGGCATCA ACCAAAGCAT GTTCGGTCTG
CGCGGTTCGG AAGACCTGGG CGGCGGTCTG AAGGCTATCT TCACGTTGGA AAGCGGCTTC
AACATCAACA ACGGCAAGTT CGCTAACAAC AACGGCATGT TCAACCGTCA AGCGTTCGTC
GGTCTGTCGA GCGCGCAATT CGGTACGGTC ACGCTGGGTC GTCAATATGA CGCAGCTCAA
GACTACCTGG CACCGCTGAC CGCAACGGGC AGCTGGGGCG GTACGTACTT CGCGCACCCG
TTCAACAACG ACAACCTGAA CACGAACGGC GGCTACGCAG TCAACAACTC GGTCAAGTAC
TCGAGCGCTA ACTACGCTGG CTTCACGTTC GGCGGCACGT ACGGCTTCTC GAACCAGGCT
GGCGCATTCG CAAACAACCG CGAATACAGC GTCGGTGCTG CATACCAGTG GCAAGGTCTG
CACCTGGGTG CTGCTTACGC CCAGCAAAAC AACCCGGGCG CAGGCAACAC GGGTGCTTCG
GACGGTTCGT ACGTCAACGC ACTGGCTGGC AACGTCGGCA ACTTCCGTCA ACGTGAATTC
GGCGTTGCTG GTTCGTACGC ATTCGGCCCG GCAACCGTCG GTCTGGCATG GACGCAATCG
CGTTCGGACA ACTTCGTGGG CGGTCAGCAA TCGCTGCGCG CTAACAACTA CGAAGTCAAT
GGCAAGTACA ACCTGACCCC GGCTCTCGGC CTGGGCGTGG CTTACACGTT CACGGACGGC
AAGGGCTACG GCGTTGGCGC GAACGGTGGT TCGGAGTCGG TGCGCTACCA CCAGATCGGC
GTGCAGGCTG ACTACTCGCT GTCGCGTCGT ACGGACGTCT ACGCTCAAGC CGTGTACCAG
CACGCAATGG GCGACGGCGG TGTCGCTTCG ATCTACAGCG GCGACAACAC GCAACTGCCG
TCGTCGTCGA AGAACCAGAC GGCTGCTACG GTCGGTCTGC GTCACCGCTT CTAA
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| Protein sequence | MKKSLIVVAV AASFASVAHA QSSVTLYGLL DAGLTYTSNV NHNAKWAAGS GGINQSMFGL
RGSEDLGGGL KAIFTLESGF NINNGKFANN NGMFNRQAFV GLSSAQFGTV TLGRQYDAAQ
DYLAPLTATG SWGGTYFAHP FNNDNLNTNG GYAVNNSVKY SSANYAGFTF GGTYGFSNQA
GAFANNREYS VGAAYQWQGL HLGAAYAQQN NPGAGNTGAS DGSYVNALAG NVGNFRQREF
GVAGSYAFGP ATVGLAWTQS RSDNFVGGQQ SLRANNYEVN GKYNLTPALG LGVAYTFTDG
KGYGVGANGG SESVRYHQIG VQADYSLSRR TDVYAQAVYQ HAMGDGGVAS IYSGDNTQLP
SSSKNQTAAT VGLRHRF
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