| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6761 |
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| Symbol | |
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| ID | 6279178 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 3093646 |
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| End bp | 3094233 |
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| Gene Length | 588 bp |
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| Protein Length | 195 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642617789 |
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| Product | protocatechuate 3,4-dioxygenase, alpha subunit |
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| Protein accession | YP_001890426 |
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| Protein GI | 187921394 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
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| TIGRFAM ID | [TIGR02423] protocatechuate 3,4-dioxygenase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.145943 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.275351 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCACTC TCAAGCAAAC GCCTTCGCAG ACGGTTGGAC CGTACTTCGC GTACGGTTTG
TGCCCGCAGC AGTACGATTT CGACTTCAAG AGCCTGTTCA CTCCGGTTCT GGCTGACCGC
GAAGCGGCCG GCGAACACAT CACGCTGGTC GGGCAAATAT TTGACGGCGA CGGCAACGTC
ATTGGCGACG CCATGCTCGA AGTGTCGCAA GTGGACTCGA ACGGTCACTT CCCGGAGTCG
CGCGAGGAAA TCCTGAAGAC CGGCTTTCGC GGTTTTGCGC GCGTGGGCAC CGGCACTGAT
CCGCACAAAC GCTTTGTCGT GGAAACGGTG AAACCGGGCC GGGCCAGTCC GGACGAAGCG
CCGCATCTGA ATGTGATCCT GACCATGCGC GGCATGCTGC TGCACACGTT CACGCGCATC
TATTTCGAGG ACGAAGCCGC GGCGAACGAG AAGGATCCCG TGCTGGCGGC GGTTCCGGCG
GAGCGGCGCG AGACGCTGAT CGCGCGCCGC GAGCCGAATG TGGCGAACGT TTACCGCTTC
GATATCCACA TGCAAGGCGC TAAGGAAACC GTATTTTTCG ATCTTTGA
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| Protein sequence | MTTLKQTPSQ TVGPYFAYGL CPQQYDFDFK SLFTPVLADR EAAGEHITLV GQIFDGDGNV
IGDAMLEVSQ VDSNGHFPES REEILKTGFR GFARVGTGTD PHKRFVVETV KPGRASPDEA
PHLNVILTMR GMLLHTFTRI YFEDEAAANE KDPVLAAVPA ERRETLIARR EPNVANVYRF
DIHMQGAKET VFFDL
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