| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6755 |
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| Symbol | |
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| ID | 6278347 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 3085256 |
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| End bp | 3088255 |
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| Gene Length | 3000 bp |
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| Protein Length | 999 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642617783 |
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| Product | D-lactate dehydrogenase (cytochrome) |
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| Protein accession | YP_001890420 |
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| Protein GI | 187921388 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0247] Fe-S oxidoreductase
[COG0277] FAD/FMN-containing dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGAACAT CATTTGATGA GCAACAGGGC GCGGGCGTCG ACGAACTGCA CGATAACGGC
ACAAGCGCAT TGAAGCGGGC GCCGCATGTT GCCACGCCGT TCACCGGCAC CGCCGCCGTG
ATGCAGGCGC TCGAAGCCGA TTTGCGCAGC CACGTGCGTG GCGAAGTGCG CTTCGACCAG
GGGTCGAAAG CGCTGTATGC GGCGGATGCG TCGAACTATC GGCAAGTGCC GCTCGCCGTC
GTCGTACCTG CGGACGTCGA CGACCTGTTG GCCACGCTCG CCGCTTGCCG TCGCAACGAC
GTGCCGTTTC TCCCGCGCGG CGGTGGCACG TCGCAGAACG GACAGTGCGT CAACGTCGCG
GTGGTCGCGG ACGCGAGCAA GTATGTGAAC CGTGTCGTGT CGGTCGATCC GGTCGCGCGG
GTTGCGATCG TCGAACCCGG CGTGGTCTGC GACACCTTGC GCGATGCCGC TGAACAACAC
GGCCTCACCT TCGCCCCCGA CCCAGCGACG CACAGCCGCT GCACGCTCGG CGGCATGATC
GCCAACAACT CGTGCGGCGC GCATTCGGTG ATGGCCGGCA AAACGGTGGA AAACGTCGAG
GCGCTGGAAA TCGCGACCTT CGATGGCGCG CGTTTCTGGG TCGGTCCGAC CTCCGATCAG
GAGCTCGAAC ACATCATCGC CGCGGGCGGC CGTCAGGGCG AAATATACGC CGCGCTGAAG
CAGTTGCGCG ATACCTACGC CGAGCAGATT CGCGCGAGAT TCCCGCAGAT CAAGCGGCGT
GTGTCGGGCT TCAATCTCGA TCAATTGCTG CCGGAAAACG GCTTTAACGT TGCGCGTGCA
CTGGTCGGCA CCGAGGGAAC GTGCGCGCTC ACCTTGCAGG CGAAAGTGCG CCTGGTGAAG
AGTCCAGCGA TGCGCGTGAT CGTCGTGGTC GGCTTCACGG ATATCTACAC GGCGGCGGAT
GCCGTGCCGC ATTTCATGCG CTGCGAGCCG ATTGCCGTCG AAGGACTGGA CCGCGCGATC
ATTCGCGGTT TGCAGGCGCG CGGTTTGAAG AAGGACGAGA TCGCGTTGCT GCCCGAAGGC
GATGCGTGGG TCGTGCTCGA ATTCGGCGCG GACACGCAAG ACGATGTGAT GCTCAAAGCG
CGAGCCGCCG CCGCTTGTTT TGCCTCCGGG GAAGCAGGCC CCAACGTCTC GGCGATGCTC
GTCGAAGATC GCGCGTTACA GGCCAAGGTC TGGTCGATTC GTGAGACGGG CGCGTCGGCG
GTGGCGTTGT CGGTCGATTC CGGCACGCCG GACCCCGTGG TCGGCTGGGA AGATGCCGCG
GTCGATCCGC TGCGTCTCGG CGACTATCTG CGCGCGTTCC AGGCGCTGGT GGATCGCTAC
GGTTACGAGA CGAGTCTCTA CGGCCATTTC GGCGATGGCT GCGTGCACGC GCGCATTACC
TTCGATCTGC GCAGTGCGGA AGGCGTGGCG ACGTGGCGCA AGTTTCTGCG CGAAGCGGCC
GAACTGGTCG TCGAATTCGG CGGTTCGCTG TCGGGCGAAC ACGGCGACGG CCAGGCCAAG
GCCGAGTTTT TGCCGATCAT GTACGGCCCC GAGTTGATGC AGGCGATGGA GCAGTTCAAG
GCAATCTGGG ATCCGGCCAA TCGTTTGAAT CCGGGCAAAG TCGTGCACGC CTATCGCGCC
GACGAGAACC TGCGCATGGG GCCCGCCTAC AAACCAGTCA CGTTGCAAAC CAGACTGACG
TTTGCGAGCC AGGAGGGCGA GGGTTTTCAG CGCGAGATCG AGCGATGCAT CGGCATGGGC
AAATGCCGCT CGCTCGAAGG CGGCACGATG TGCCCGAGTT ATCGCGCGAC ACGCGAAGAG
AAATATTCGA CGCGTGGCCG CGCGCATCTG TTCTGGGAAA TGCTGCAAGG CGACGTGATT
GCCGACGGCT GGCAAAGCCG CGAAGTGAAG GAAGCACTCG ATACGTGCCT CGCCTGCAAG
GGCTGCAAAT CCGATTGCCC GACGCATACG GATATGGCTT CATACAAGGC GGAATTTCTT
TCGCATTACT ACGAGACGAA TCGTCGGCCA CGGCAGGCGC TGTTCATGGG ACGTATCGGC
GAATGGGCGC CGTGGGCGGC GCGTTTTCCA CGTCTGACGA ACTTCATGAC GTCGGCGCCG
TGTTTGTCTT CGTTCGGCAA GTGGCTGGCC GGCGTGGCGC AAACGCGCGA ACTGCCTCGT
TTCGCGGATG CCACATACAG GCAGATCGCG CGACGTTCGC CGCAATCGGC GCGTGATGCT
CGCGGCGACG TGAAGAAAGT GATCCTGTGG GTCGATACGT TCAACGATCA CTTCACGCCC
GAGATCGCGC AGGCCGCTGC CGATGTCTTA AAGCAATTGG GTTGGCATGT CGTGTTGCCG
AAGAACCGGT TGTGCTGCGG GCGCCCGCTG TATGACTTCG GCCTGCTCGA ACGCGCGCGC
GAGTTGCTCA CTCATATTCT CGACGACCTC GCGGACGATA TTGCCGCCGG CGTGCCGCTA
GTCGGTCTCG AACCGGGTTG TTTGTCGGTG TTCAAGGACG AATTGCTGAA GCAACTGCCC
AATCATGCAT TGGCGAAGAA GCTGTCGGCG CAAACTTTCC TGTTCTCCGA TTTCGTCGCG
CGTCAGTCGT TCGATTGGCC GACGCTCGCC GCGGACGTAA TCGTGCACGG ACATTGCCAC
CAGAAGGCGC TGTTCGGCAT GCAAGGCGAT ACCGCGCTGT TGAACAAACT CGGCGTGAAG
TGGAAACTGC TCGATACAGG ATGCTGCGGT ATGGCCGGAT CGTTCGGCTT CAACGCGGAG
CATCACGCGC TGTCCACGAA GATCGGCGAA GACAAGCTAT TTCCGGCGGT GCGTGCGGCG
AGCGTGGAGA CGATCGTGTT GACCAACGGC TTCAGTTGCC GTGAACAGAT CGAGCAGGGG
ACGGGGCGTC ACGCAATGCA TATCGCGCAA CTCGCGCAGC GGGCGTTGGC GGCGCGCTAA
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| Protein sequence | MGTSFDEQQG AGVDELHDNG TSALKRAPHV ATPFTGTAAV MQALEADLRS HVRGEVRFDQ
GSKALYAADA SNYRQVPLAV VVPADVDDLL ATLAACRRND VPFLPRGGGT SQNGQCVNVA
VVADASKYVN RVVSVDPVAR VAIVEPGVVC DTLRDAAEQH GLTFAPDPAT HSRCTLGGMI
ANNSCGAHSV MAGKTVENVE ALEIATFDGA RFWVGPTSDQ ELEHIIAAGG RQGEIYAALK
QLRDTYAEQI RARFPQIKRR VSGFNLDQLL PENGFNVARA LVGTEGTCAL TLQAKVRLVK
SPAMRVIVVV GFTDIYTAAD AVPHFMRCEP IAVEGLDRAI IRGLQARGLK KDEIALLPEG
DAWVVLEFGA DTQDDVMLKA RAAAACFASG EAGPNVSAML VEDRALQAKV WSIRETGASA
VALSVDSGTP DPVVGWEDAA VDPLRLGDYL RAFQALVDRY GYETSLYGHF GDGCVHARIT
FDLRSAEGVA TWRKFLREAA ELVVEFGGSL SGEHGDGQAK AEFLPIMYGP ELMQAMEQFK
AIWDPANRLN PGKVVHAYRA DENLRMGPAY KPVTLQTRLT FASQEGEGFQ REIERCIGMG
KCRSLEGGTM CPSYRATREE KYSTRGRAHL FWEMLQGDVI ADGWQSREVK EALDTCLACK
GCKSDCPTHT DMASYKAEFL SHYYETNRRP RQALFMGRIG EWAPWAARFP RLTNFMTSAP
CLSSFGKWLA GVAQTRELPR FADATYRQIA RRSPQSARDA RGDVKKVILW VDTFNDHFTP
EIAQAAADVL KQLGWHVVLP KNRLCCGRPL YDFGLLERAR ELLTHILDDL ADDIAAGVPL
VGLEPGCLSV FKDELLKQLP NHALAKKLSA QTFLFSDFVA RQSFDWPTLA ADVIVHGHCH
QKALFGMQGD TALLNKLGVK WKLLDTGCCG MAGSFGFNAE HHALSTKIGE DKLFPAVRAA
SVETIVLTNG FSCREQIEQG TGRHAMHIAQ LAQRALAAR
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