Gene Bphyt_6746 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_6746 
Symbol 
ID6280062 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp3073346 
End bp3074617 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content65% 
IMG OID642617774 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_001890411 
Protein GI187921379 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.909176 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACCC CCTCGCAAGT TTCCGTGCCG TCCGGTCAGC CAATGCACGG CCTCGACTAT 
TCGGCGCGAC ATGAACGTTA CTGGCGCCGC AATCTGGCCG TGTGCGTATT CGGCTCGTTC
ACGACGCTCG TCAGCCTGAG CATGCTGCTG CCGTTCTTGC CCATCTATGT CCAGCAACTC
GGCGTGCAGT CGCAGTCCGC CGTCATCCAG TGGTCGGGAA TCGCGTTCGG CGCCACATTT
CTCGGCACTG CCGTCACGGC GCCCGTGTGG GGGCGCCTTG CCGATCGTTA TGGCCGCAAG
CCGATGCTGG TGCGCGCGGC CGTCGGCATG GCCGTGGTGA TGTCGTTGAT CGGTGTTGCG
CACAACGTGC ATCAACTCGT CGCCCTGCGT TTGCTCGCGG GTCTGGTGGG CGGCTACTCG
TCGGCGTCGA CGGTGATGGT CGGCACCCAG GCGCCGAAGG AACGCGCGGG CTGGGCGCTC
GGCGTCCTGT CCACGGGCGC GCTGGCCGGC AACCTGATCG GGCCGCTCGT CGGCGGTTTT
TTGCCGGGCT GGCTCGGCAT TCGCGGCACG TTCTTCGCCG GCGGCGCCAT GATCGCGGTC
GCCGCCCTGC TCACGATTTT TGTCGTCAAG GAAGATTTCG ATCCTGCCAC TCATTCGAGC
CGCCGTCCCC CAGAACACGC CACGGCGAGT ACGCATCGCA ACAACTACCC GGTGATCGCC
GCGTTGCTCG TCACGGCGAT GATGGTGCTG CTTGCCAACA TGTCGATCGA GCCGGTCATC
ACCGTCTATG TGGGCAGTCT CGGCGTGCAG TCGCTGCATC TGGCGCGCGT GGCGGGTATC
GTGATGGCCT GTTCGGCTTT CGGCAGCATG CTGACGGCCG CGCGCCTCGG CGCATTGGCC
GATCGGGTCG GCAGTTGGAA CGTGATCGTC GCTTGCCTGG TGCTCACGGG TCTGGTGATG
ATTCCGCAAG CGTTCGTTCA CGCGTGGTGG CAACTCGCGG GTTTACGCGC GCTGATGGGC
ATGACGCTGG CGGGTCTCCT GCCTGCGATT GCGAAACTCG CCCGGCATGC AGTGGAAGAG
CACAAGACCG GTCAGATGCT CGGCTATCTG CAGTCGGCGC AATTCAGCGG ACAGGTCGTC
GGTCCGATTA TCGGCGGCGT GATCGCTGTC CATCTCGGGC TGCACTCCGT GTTCTTCGTC
ACCGGCTCGT TGCTGGTGGC GTGTGCCGCG CTTGCGCAGT GGGCCCGGAC TCGTCAGAGT
CTCGCTGTTT GA
 
Protein sequence
MNTPSQVSVP SGQPMHGLDY SARHERYWRR NLAVCVFGSF TTLVSLSMLL PFLPIYVQQL 
GVQSQSAVIQ WSGIAFGATF LGTAVTAPVW GRLADRYGRK PMLVRAAVGM AVVMSLIGVA
HNVHQLVALR LLAGLVGGYS SASTVMVGTQ APKERAGWAL GVLSTGALAG NLIGPLVGGF
LPGWLGIRGT FFAGGAMIAV AALLTIFVVK EDFDPATHSS RRPPEHATAS THRNNYPVIA
ALLVTAMMVL LANMSIEPVI TVYVGSLGVQ SLHLARVAGI VMACSAFGSM LTAARLGALA
DRVGSWNVIV ACLVLTGLVM IPQAFVHAWW QLAGLRALMG MTLAGLLPAI AKLARHAVEE
HKTGQMLGYL QSAQFSGQVV GPIIGGVIAV HLGLHSVFFV TGSLLVACAA LAQWARTRQS
LAV