Gene Bphyt_6735 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_6735 
Symbol 
ID6279070 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp3060050 
End bp3061357 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content59% 
IMG OID642617763 
Productsodium:dicarboxylate symporter 
Protein accessionYP_001890400 
Protein GI187921368 
COG category[C] Energy production and conversion 
COG ID[COG1301] Na+/H+-dicarboxylate symporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAACC GTCTTACTTT CTATATTGTG GCCGGCATGG CGCTCGGCGT GATCGTCGGC 
TATGTGTGTC ATCGCAGCGC TGCGGGCGCT GCCGAAGCGA AGACCATCGC GGGTTACTTC
TCGATCATTA CCGACATTTT CTTGCGGCTC GTGAAGATGA TCATCGCGCC GCTAGTCTTC
GCGACGTTGG TGTCTGGGCT CGCCGGCATG GAAGGCACAA GCGATGTGCG CAGGATCGGG
TTCAGGTCGG TGGGATGGTT CGTATGCGCG TCGCTATTCT CGCTCGCGCT CGGCCTCGCC
CTCGCGAACG CGCTGCAACC TGGTGCGGGA CTGCATATGA CGCAGACCAG TTCCGACGTG
GCCACGGGCC TGAACACCGC GGGCCTGAAT TTCAAGGACT TCGTCACGCA CGCGTTTCCT
TCCAGCATCA TCGATGCGAT GGCGCGAAAC GACATCCTGC AGATCCTTGT CTTTTCCGTC
CTGTTCGGCG TCGTTCTAAG CGCCATCAAA AAAGACCCGC GTGTCACACC GTTGATCGCC
GGCATCGATG CGCTCGTACC GGCCATGTTG AAACTGACCG ACTACGTGAT GCGGCTCGCG
CCCATCGGTG TCTTTGGCGC TCTGGCATCC GCGATTACCG TGAATGGCCT GGATGTGCTG
ACCACGTACG GCAAGCTCGT CGGCAGTTTC TATCTCGGTC TCGTCACGCT GTGGATTGTC
CTCATCTTCG TCGGCTATGC CTTTCTGGGC AAGTCGATCT GGAGGTTGTT GAAAGCGGTC
CGGGAACCCG CCATGCTCGC CTTTTCGACC GCGAGTAGCG AGGCTGCTTA CCCGCGTCTT
ACCGAGAAGC TCGAAGCGTT CGGTATCGAC AAGAAAGTCG TCGGTTTTAC GCTGCCGCTC
GGCTACGCGT TCAATCTCGA CGGCTCGATG ATGTATCAGG CGTTTGCCGC GATTTTCATT
GCGCAGGCAT TCGGCATCGA CATGCCGCTC GGCGCGCAGA TCATGATGTT GCTGGTCTTG
ATGTTGAGCA GCAAGGGAAT GGCCGGCGTC GCAAGAGGTT CCGTGGTGGT GGTGGCCGCC
ATTGCGCCGA TGTTTCATCT GCCTCCTTCC GGCGTAGTGC TGATCCTCGC GATCGATCAG
ATACTCGATA TGGGGCGAAC CGCGACGAAT GTAATTGGCA ATAGCATCGC GACGGCGGTT
ATCGCGAAGT GGGAAGCGAA GCGTGCGGTC AAACATATCG ACGGCGCCGA CAGCCCGGCG
TTGGGCCGAT TGCAAGAATT GCGCGAATTG CAAGGCGAGA CGAAATGA
 
Protein sequence
MKNRLTFYIV AGMALGVIVG YVCHRSAAGA AEAKTIAGYF SIITDIFLRL VKMIIAPLVF 
ATLVSGLAGM EGTSDVRRIG FRSVGWFVCA SLFSLALGLA LANALQPGAG LHMTQTSSDV
ATGLNTAGLN FKDFVTHAFP SSIIDAMARN DILQILVFSV LFGVVLSAIK KDPRVTPLIA
GIDALVPAML KLTDYVMRLA PIGVFGALAS AITVNGLDVL TTYGKLVGSF YLGLVTLWIV
LIFVGYAFLG KSIWRLLKAV REPAMLAFST ASSEAAYPRL TEKLEAFGID KKVVGFTLPL
GYAFNLDGSM MYQAFAAIFI AQAFGIDMPL GAQIMMLLVL MLSSKGMAGV ARGSVVVVAA
IAPMFHLPPS GVVLILAIDQ ILDMGRTATN VIGNSIATAV IAKWEAKRAV KHIDGADSPA
LGRLQELREL QGETK