Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_6735 |
Symbol | |
ID | 6279070 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 3060050 |
End bp | 3061357 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642617763 |
Product | sodium:dicarboxylate symporter |
Protein accession | YP_001890400 |
Protein GI | 187921368 |
COG category | [C] Energy production and conversion |
COG ID | [COG1301] Na+/H+-dicarboxylate symporters |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAAACC GTCTTACTTT CTATATTGTG GCCGGCATGG CGCTCGGCGT GATCGTCGGC TATGTGTGTC ATCGCAGCGC TGCGGGCGCT GCCGAAGCGA AGACCATCGC GGGTTACTTC TCGATCATTA CCGACATTTT CTTGCGGCTC GTGAAGATGA TCATCGCGCC GCTAGTCTTC GCGACGTTGG TGTCTGGGCT CGCCGGCATG GAAGGCACAA GCGATGTGCG CAGGATCGGG TTCAGGTCGG TGGGATGGTT CGTATGCGCG TCGCTATTCT CGCTCGCGCT CGGCCTCGCC CTCGCGAACG CGCTGCAACC TGGTGCGGGA CTGCATATGA CGCAGACCAG TTCCGACGTG GCCACGGGCC TGAACACCGC GGGCCTGAAT TTCAAGGACT TCGTCACGCA CGCGTTTCCT TCCAGCATCA TCGATGCGAT GGCGCGAAAC GACATCCTGC AGATCCTTGT CTTTTCCGTC CTGTTCGGCG TCGTTCTAAG CGCCATCAAA AAAGACCCGC GTGTCACACC GTTGATCGCC GGCATCGATG CGCTCGTACC GGCCATGTTG AAACTGACCG ACTACGTGAT GCGGCTCGCG CCCATCGGTG TCTTTGGCGC TCTGGCATCC GCGATTACCG TGAATGGCCT GGATGTGCTG ACCACGTACG GCAAGCTCGT CGGCAGTTTC TATCTCGGTC TCGTCACGCT GTGGATTGTC CTCATCTTCG TCGGCTATGC CTTTCTGGGC AAGTCGATCT GGAGGTTGTT GAAAGCGGTC CGGGAACCCG CCATGCTCGC CTTTTCGACC GCGAGTAGCG AGGCTGCTTA CCCGCGTCTT ACCGAGAAGC TCGAAGCGTT CGGTATCGAC AAGAAAGTCG TCGGTTTTAC GCTGCCGCTC GGCTACGCGT TCAATCTCGA CGGCTCGATG ATGTATCAGG CGTTTGCCGC GATTTTCATT GCGCAGGCAT TCGGCATCGA CATGCCGCTC GGCGCGCAGA TCATGATGTT GCTGGTCTTG ATGTTGAGCA GCAAGGGAAT GGCCGGCGTC GCAAGAGGTT CCGTGGTGGT GGTGGCCGCC ATTGCGCCGA TGTTTCATCT GCCTCCTTCC GGCGTAGTGC TGATCCTCGC GATCGATCAG ATACTCGATA TGGGGCGAAC CGCGACGAAT GTAATTGGCA ATAGCATCGC GACGGCGGTT ATCGCGAAGT GGGAAGCGAA GCGTGCGGTC AAACATATCG ACGGCGCCGA CAGCCCGGCG TTGGGCCGAT TGCAAGAATT GCGCGAATTG CAAGGCGAGA CGAAATGA
|
Protein sequence | MKNRLTFYIV AGMALGVIVG YVCHRSAAGA AEAKTIAGYF SIITDIFLRL VKMIIAPLVF ATLVSGLAGM EGTSDVRRIG FRSVGWFVCA SLFSLALGLA LANALQPGAG LHMTQTSSDV ATGLNTAGLN FKDFVTHAFP SSIIDAMARN DILQILVFSV LFGVVLSAIK KDPRVTPLIA GIDALVPAML KLTDYVMRLA PIGVFGALAS AITVNGLDVL TTYGKLVGSF YLGLVTLWIV LIFVGYAFLG KSIWRLLKAV REPAMLAFST ASSEAAYPRL TEKLEAFGID KKVVGFTLPL GYAFNLDGSM MYQAFAAIFI AQAFGIDMPL GAQIMMLLVL MLSSKGMAGV ARGSVVVVAA IAPMFHLPPS GVVLILAIDQ ILDMGRTATN VIGNSIATAV IAKWEAKRAV KHIDGADSPA LGRLQELREL QGETK
|
| |