| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6716 |
|---|
| Symbol | |
|---|
| ID | 6277981 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | - |
|---|
| Start bp | 3037238 |
|---|
| End bp | 3039163 |
|---|
| Gene Length | 1926 bp |
|---|
| Protein Length | 641 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642617745 |
|---|
| Product | K potassium transporter |
|---|
| Protein accession | YP_001890382 |
|---|
| Protein GI | 187921350 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3158] K+ transporter |
|---|
| TIGRFAM ID | [TIGR00794] potassium uptake protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.19104 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 52 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCAGT CAGTATCCGC CGCGCCCGAT GCGGGCCATT CCGGCGGGCG CGGGCATCAC
CGCCCGGCGA TGCCCGCACT CGCGCTTGCA GCATTAGGTG TGGTGTATGG CGACATCGGC
ACCAGCCCAC TGTACACGCT GCAGACGGTG TTCAATCCAG TGAACGGGCT GTCGCTCAAC
GCGCTGAATG TGGTCGGCAT TGTGTCGCTG ATCGTCTGGT CGCTGATCAT CGTCGTCTCG
CTCAAATACG TCACGTTGAT TCTTCGCGCC AACAATCACG GCGAGGGCGG GATCATGGCG
TTGCTGGCGC TGGCCGCGTC GTCGGTTTCT GCGCGGCCGC GCTTGCGTCG CACGTTGCTG
GGCATCGGCA TTATGGGCGC GGCGCTCTTT TACGGCGACA GTGTAATTAC GCCGGCGATC
TCGGTGCTGA GCGCGGTAGA AGGTCTCGAA GTGGCCGCGC CGTTCCTTAA AACCTGCGTG
ATTCCCGTGA CGCTGGTTGC GCTGGTCACG TTGTTCCTGA TGCAGAAGCA TGGCACGGCC
GGTATCGGCA TCGTGTTCGG ACCGGTGATG GTGCTCTGGT TCATCGTGCT TGCCGTGGCG
GGCGTCGTCA ACATGATGCG GGCGCCCGCG ATTCTCGTTG CGCTCAATCC GCTCACGGGA
CTGGCGTTCT GCCTGCATCA TCGGTGGCTC GCGTTCGTTG CTTTGGGCGC GGTCGTTCTG
TCGTTGACCG GCGCGGAAGC GCTATATGCC GACATGGGGC ATTTTGGCGC GAAGCCGATC
CGGCTGACGT GGTTCGGCCT CGTGTTTCCA GCACTCGCGC TGAACTATCT GGGGCAGGGC
GCGTTGCTGC TTGCCGATCC GGGCGCGCTG CAAAATCCGT TCTACAAACT GTTTCCGCAA
TGGGCGCTGT ATCCGATGAT CGTGCTCTCG ACGGTCGCGA CCGTGATCGC GTCGCAAGCC
GTTATCTCGG GTACGTACTC GATGACGAAG CAGGCGATGC AACTCGGCTT TCTTCCGCGC
ATGAACGTCG TCTATACCTC GGAAAGGGAG ATGGGGCAAA TCTACGTGCC GGGCATCAAC
TGGACGCTAT TAGCTGCTGT CGTGGCAGCG GTGGTCGGCT TCGGTTCATC CACGGCGCTC
GGTTCCGCGT ACGGTATCGC CGTGACGGGC ACGATGCTGA TCACGACCAT CCTGACGTTC
TTCGTCATTC GCTATGCGTG GCACTACAAC TGGTTTCTAT GCGTGTTCGC GACCGGCTTC
TTCTTCTTGA TCGACGCGGC ATTTTTCTCC GCGAACCTGC TGAAGCTGAT GGAAGGCGGC
TGGTTCCCGC TTCTGGTCGG ACTGATCATC TACACGATCA TGGCGACCTG GGGACGAGGC
TGGGAGATGA TGCGCGCCGA AGCGCGCGTG AGAGCCGGGA CGACGCCGCT CAAGCCATAT
CTCGCGACAC TGCTGAAGGA ATCGCCGATT CGTTGCGGTG GCACGGCGAT CTTTCTTTCG
CCGGATCCTG ATGGCGTGCC GCATTCGTTG ATCAACAACC TGATGCATAA CCGCGTGCTG
CACAAACGGG TTGTGTTCGT GACGGTGAAC AACGAGGAGA TACCGTGGGT GCCTGCCAGC
GAGCGTGTGA GCGTGCATCC ACTCGATTCT GAATGCTACC AGGTCACAAT CACATATGGT
TTCATGGATG AAGTCGATCT GCCGCGCGCA CTTGAAGTTT GCAGGGCGTA CGGTTTGTCA
TTCGAGCCGG CGGAGACTTC CTACTTTCTG AGCCGCGCGA CTCTCGTGCC GACTCGTGAT
AGCGGCATGG CGATGTGGCG AGAGCGTTTG TTCTCAGTCA TGTTGCATAA CGTGGGTAAC
GTCGCGGCTT ATCTGAAGCT GCCGGCCAAT CGAGTGATCG AGTTGGGGGC ACGGGTGGAG
ATTTGA
|
|---|
| Protein sequence | MSQSVSAAPD AGHSGGRGHH RPAMPALALA ALGVVYGDIG TSPLYTLQTV FNPVNGLSLN
ALNVVGIVSL IVWSLIIVVS LKYVTLILRA NNHGEGGIMA LLALAASSVS ARPRLRRTLL
GIGIMGAALF YGDSVITPAI SVLSAVEGLE VAAPFLKTCV IPVTLVALVT LFLMQKHGTA
GIGIVFGPVM VLWFIVLAVA GVVNMMRAPA ILVALNPLTG LAFCLHHRWL AFVALGAVVL
SLTGAEALYA DMGHFGAKPI RLTWFGLVFP ALALNYLGQG ALLLADPGAL QNPFYKLFPQ
WALYPMIVLS TVATVIASQA VISGTYSMTK QAMQLGFLPR MNVVYTSERE MGQIYVPGIN
WTLLAAVVAA VVGFGSSTAL GSAYGIAVTG TMLITTILTF FVIRYAWHYN WFLCVFATGF
FFLIDAAFFS ANLLKLMEGG WFPLLVGLII YTIMATWGRG WEMMRAEARV RAGTTPLKPY
LATLLKESPI RCGGTAIFLS PDPDGVPHSL INNLMHNRVL HKRVVFVTVN NEEIPWVPAS
ERVSVHPLDS ECYQVTITYG FMDEVDLPRA LEVCRAYGLS FEPAETSYFL SRATLVPTRD
SGMAMWRERL FSVMLHNVGN VAAYLKLPAN RVIELGARVE I
|
|---|
| |