| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6713 |
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| Symbol | |
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| ID | 6278375 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 3033116 |
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| End bp | 3034060 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642617742 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_001890379 |
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| Protein GI | 187921347 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0954433 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTACGCC GTAAAACCTA TCTCGTTACT GGCGCCCGCG GGTTTCTGGG AACGGCATTG
TCCGCACGCC TGCGCGCCGA GGGCCACATC GTTAGGGCCG GAGTTTCAGC GGCCCCTATT
CGAGATTGTG AAGTGGCGTG CCCGCTCACT GCATCTGTTT CGGAGTGGCA GAGCGCGATT
GAAGGTTGTG ACGGAGTTTT CCACCTCGCG TGGTCGACCG TTCCTGGATC CGCTAACAAA
GCTCCCCTGA GTGACCTCGA AACTAATTTG CTGGGGACCG TTCGCCTACT TGAGGCAATA
CGGCAACAAC CGAACACCAA GATCCTTTTT GCATCATCGG GTGGAGCGGT CTACGGGACG
CCGACAAGAA TACCGATCGA CGAAGACCAC TCCCGAAGTC CCCTAGGAGC ATACGGCGCT
GCGAAGCTCG CCGCCGAAAC TTATTTAGAC GTGTACCGCC GGCAATGGCA AGTGGACGCG
AGAATTATGC GGCTCAGCAA CCCATACGGG CCGGGACAAA ATATTAACGG AAATCAAGGC
GCGGCTACAA TATTTGCAGC TCGCGCCGTT AAGCAACAAA CCATCGATAT TTGGGGCGAA
GGGGATATCG TTCGGGACTA CCTTTACATA GACGATGCGA TTGACGCATT TTCCAGATTC
ATGAATACAG ACGCTGCAGT ATTTGAAAAT GCGATGCCTG TATTGAATGT CGGCTCCGGA
AAAGGAATAT CCTTGAACGA AATAATTTTG ACGATTGAGA GAATTCTCAA GAGGAAAATA
AAAGTTCAAT ACAGTCCATC GCGAGGATTT GACGTCGACG TGAATGTTCT GGACGTCACC
CATGCCTACC ATTTGATTGG GTGGCGCCCG AAGATCGGCT TCGCTCAAGG GATGGCACAA
TGCCTTGCAT ACCTGAAGGA ATCCCTTTCT GTGACACCAC AGTGA
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| Protein sequence | MLRRKTYLVT GARGFLGTAL SARLRAEGHI VRAGVSAAPI RDCEVACPLT ASVSEWQSAI
EGCDGVFHLA WSTVPGSANK APLSDLETNL LGTVRLLEAI RQQPNTKILF ASSGGAVYGT
PTRIPIDEDH SRSPLGAYGA AKLAAETYLD VYRRQWQVDA RIMRLSNPYG PGQNINGNQG
AATIFAARAV KQQTIDIWGE GDIVRDYLYI DDAIDAFSRF MNTDAAVFEN AMPVLNVGSG
KGISLNEIIL TIERILKRKI KVQYSPSRGF DVDVNVLDVT HAYHLIGWRP KIGFAQGMAQ
CLAYLKESLS VTPQ
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