Gene Bphyt_6710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_6710 
Symbol 
ID6278224 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp3029045 
End bp3029809 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content51% 
IMG OID642617739 
ProductABC transporter related 
Protein accessionYP_001890376 
Protein GI187921344 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1134] ABC-type polysaccharide/polyol phosphate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGCAC ATATTCAGCT AACCAACGCT ACGCTCGACA TACCAATCTA TGGTGTGCAG 
GGGCGCTCAC TGAAAAAACG GATTGCTTCG TTGCGGAGTC GCGGTGCCGA AGTTAACAAG
CGGCCCGACA CTGTTATCCT TCGGGCAATA AACGATCTCA CGATCTCGAT CAAGGCAGGC
GATCGTATCG GTTTGATCGG CCATAATGGG GCGGGGAAAT CGACGCTTTT GCGTGTAATG
GCAGGTATTT ACCCGCCAAC AGCGGGCTCA GTGGAGACCG AGGGGAAGTC TGTACCGCTT
TTGGATATAA GTCTGGGAAT GGACGAGAAC TCGACCGGAT GGCAAAACAT GCGCCTTCGG
GGTCTCCTTC TGGGAATGGG AGAGGATGAG ATCAATGAAA AGCAGAGTGA AATAGCCGCG
TTTTCTGAAC TCGGGGATTT TTTGGATTTA CCGATTAGAA CGTATTCGAC GGGTATGAAG
GTAAGGCTCG GATTCGCAAT TTCCACTGCG GTTGACGCGC AAATTTTGCT ACTTGACGAG
GTTATGGGTG TAGGAGATGC GTCGTTCAAA GATAAGGCCA ATAGACGGCT GGCTGAACTT
CATGAGCGAT CCGAAATTGT CGTGCTCGCT TTGCACGACA ATGCAACCAT CCGAAAAACT
TGCGATAAAG CTCTCTGGAT GGATAAAGGA CGCGCCAAAA TGTTCGGTCC GGCGGAGGAA
GTGCTGGAGG CGTATGAGGC TAGCGTTAGC CAATCGACGG CATAG
 
Protein sequence
MMAHIQLTNA TLDIPIYGVQ GRSLKKRIAS LRSRGAEVNK RPDTVILRAI NDLTISIKAG 
DRIGLIGHNG AGKSTLLRVM AGIYPPTAGS VETEGKSVPL LDISLGMDEN STGWQNMRLR
GLLLGMGEDE INEKQSEIAA FSELGDFLDL PIRTYSTGMK VRLGFAISTA VDAQILLLDE
VMGVGDASFK DKANRRLAEL HERSEIVVLA LHDNATIRKT CDKALWMDKG RAKMFGPAEE
VLEAYEASVS QSTA