Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_6710 |
Symbol | |
ID | 6278224 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 3029045 |
End bp | 3029809 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642617739 |
Product | ABC transporter related |
Protein accession | YP_001890376 |
Protein GI | 187921344 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1134] ABC-type polysaccharide/polyol phosphate transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 58 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGGCAC ATATTCAGCT AACCAACGCT ACGCTCGACA TACCAATCTA TGGTGTGCAG GGGCGCTCAC TGAAAAAACG GATTGCTTCG TTGCGGAGTC GCGGTGCCGA AGTTAACAAG CGGCCCGACA CTGTTATCCT TCGGGCAATA AACGATCTCA CGATCTCGAT CAAGGCAGGC GATCGTATCG GTTTGATCGG CCATAATGGG GCGGGGAAAT CGACGCTTTT GCGTGTAATG GCAGGTATTT ACCCGCCAAC AGCGGGCTCA GTGGAGACCG AGGGGAAGTC TGTACCGCTT TTGGATATAA GTCTGGGAAT GGACGAGAAC TCGACCGGAT GGCAAAACAT GCGCCTTCGG GGTCTCCTTC TGGGAATGGG AGAGGATGAG ATCAATGAAA AGCAGAGTGA AATAGCCGCG TTTTCTGAAC TCGGGGATTT TTTGGATTTA CCGATTAGAA CGTATTCGAC GGGTATGAAG GTAAGGCTCG GATTCGCAAT TTCCACTGCG GTTGACGCGC AAATTTTGCT ACTTGACGAG GTTATGGGTG TAGGAGATGC GTCGTTCAAA GATAAGGCCA ATAGACGGCT GGCTGAACTT CATGAGCGAT CCGAAATTGT CGTGCTCGCT TTGCACGACA ATGCAACCAT CCGAAAAACT TGCGATAAAG CTCTCTGGAT GGATAAAGGA CGCGCCAAAA TGTTCGGTCC GGCGGAGGAA GTGCTGGAGG CGTATGAGGC TAGCGTTAGC CAATCGACGG CATAG
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Protein sequence | MMAHIQLTNA TLDIPIYGVQ GRSLKKRIAS LRSRGAEVNK RPDTVILRAI NDLTISIKAG DRIGLIGHNG AGKSTLLRVM AGIYPPTAGS VETEGKSVPL LDISLGMDEN STGWQNMRLR GLLLGMGEDE INEKQSEIAA FSELGDFLDL PIRTYSTGMK VRLGFAISTA VDAQILLLDE VMGVGDASFK DKANRRLAEL HERSEIVVLA LHDNATIRKT CDKALWMDKG RAKMFGPAEE VLEAYEASVS QSTA
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