| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6688 |
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| Symbol | |
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| ID | 6277899 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 3002904 |
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| End bp | 3003719 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642617718 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_001890355 |
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| Protein GI | 187921323 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.811487 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACGAT GCCGGTTTCA ATGTCGCCCC GGTGACAGCA GCCGGCAGCG AGCGCCGTGC
GCAGTAGATA TTGGCGAGGG TGTGGGATCT CATGACGGTA TCCTGACCGG TGCGAATAAT
CGCGCGGGCG TATATGCACG GTTTGGTGAT GCATTTCTGC CATGGAAACG CAAACACATC
CCATGTACTG TGCACAAGGA CCGCTTCATG GACGACACCA GCGTTTTCGA CAAGCTTCGC
CGCGCTTGCA GGGCATTGCA TATCGGATCC TCAGCTCGGT CGCAGAGGCG GAAGACGTGG
TGCAGGACGC CTGGTTGCGC TGGGCATTCG ACTACTCGCG AAACGATCGA GAATGCGGAA
GCGTGGCTTG TTGCCGTGAC CAAGCGAATT TCCATTAACC GTTTGTGCGC AGCGAAAATC
CAGCGCGAAC ATTACACCGA CACCTGGCTT TCTGAGCCGC ACTTCGCCGA CTATCCCGCA
ACGCCGGAGC AGGCGAAGGA GCGCGCTGAC GACGTATCGG TAGCGTTTCT GATGCTGCTC
GAACGGTTGA GCCCGGAAGT GCGTGCGGCT TCCCTGTTAC GCGAAGTATT CGATGCGGAC
TACGATGAAA TAGCAAAGGC CATCGGCAAG AGCGAAGCGG CGTTCCGGCA ACTAGTGAGC
CGCGCGAAGA CGCAGTTGCG CGAAGATCGT CCGCGCTTCG TCGTGTCGCG TGAGACGCAT
CATCGGTTGC TGCAGGCCTT TGCGCACGCC TTGGAGCGGG GCGATTTCGC AGCGATCAAT
TGCGATAGCG GCGAGATCAT GCCGCGACAT TGCTGA
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| Protein sequence | MARCRFQCRP GDSSRQRAPC AVDIGEGVGS HDGILTGANN RAGVYARFGD AFLPWKRKHI
PCTVHKDRFM DDTSVFDKLR RACRALHIGS SARSQRRKTW CRTPGCAGHS TTRETIENAE
AWLVAVTKRI SINRLCAAKI QREHYTDTWL SEPHFADYPA TPEQAKERAD DVSVAFLMLL
ERLSPEVRAA SLLREVFDAD YDEIAKAIGK SEAAFRQLVS RAKTQLREDR PRFVVSRETH
HRLLQAFAHA LERGDFAAIN CDSGEIMPRH C
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