Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_6658 |
Symbol | |
ID | 6279556 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 2971779 |
End bp | 2972948 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642617690 |
Product | putative transposase |
Protein accession | YP_001890327 |
Protein GI | 187921295 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.371491 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTGGAGG TTGCGGACAT CTTCCGCAGC CACGGGCCGG CGTGGCGAGC CACGACACAT CTGAGCCTGG GGCAGCTGAA GGTCATGTCG GCCATCGAAC GGTGCCGCAC CGCGGCACTG GGCGGACATG TGCTGCGCTG TTCAGGCTGC ACAATGACAG AGGTGTCCTT CAACTCGTGC CGGAACCGGC ATTGCCCGAA GTGCCAGGCC AGTGCCGCAC ACCGCTGGCT GGAGGCACGC CAGGCCGATC TGCTACCTGT CGAGTACTTC CACGTCGTCT TCACGCTTCC CGCACCCATC AGCGCCATCG CCTGCTATAA CAAACGGATC ATCTACGGCC TGCTGCTCGA CATCGCCGCT GACACGCTGC GCACGATCGC CGGGGATCCC AGGCATCTCG GCGCCCAGAT TGGCGCCACG CTCGTACTGC ACACCTGGGG CTCGGCGCTG ACGCATCACC CGCATGTGCA CGGCATCGTA CCCGGTGGCG GACTGTCGCC TGACGGTGAG CGCTGGATCG CCTGCCGCCC CGGCTTCTTC CTGCCCGTGC GCGTCCTCTC ACGCCTGTTC CGGCGCCGCT TCCTCGAAGC ACTCGCAGAC GCCCACAGGC GCGGCCAGTT GCAGTTCTTC GGCGAGTACA CCGGCCTCGC TGATCCCGCT ACCTTTGCCC GGTGGCTTGC GCCGCTACGT ACCTGCGAAT GGGTGGTCTA CGCCAAACGC CCGTTCGCCG GACCGGAAGC GGTGCTCGAG TACCTCTCAC GCTACACGCA CCGCGTCGCC ATCTCCAACC AGCGCCTCGT CGCCTTCGAT GAGCGCGGTG TGACGTTCCG CTGGAAGGAC TACCGTGCAA AGGGACGCAC CCGCTACAAG ACCATGACCC TCGAAACCGG CGAATTCATG CGCCGCTTCC TGCTCCATGT GCTGCCCAGT GGCTTCCATC GCATCCGTCA CTACGGATTG CTCGCCAACC CGGTGCGCCG CGCCAGACTC GCGCGGGTGC GCGATCTGCT GCACATCGCA CCCGCGACCA GCCCATCACC GGACCACGCC ATCATCGAAA CCCGGCCCGT CTTCATCTGC CGGCACTGCG GCGCACCGAT GATCGTCATC GACATCCTCG CGCGCAGCGC CCCGATCCGC GCACCGCCCA TGCGCCTGGA TCAGCCATGA
|
Protein sequence | MLEVADIFRS HGPAWRATTH LSLGQLKVMS AIERCRTAAL GGHVLRCSGC TMTEVSFNSC RNRHCPKCQA SAAHRWLEAR QADLLPVEYF HVVFTLPAPI SAIACYNKRI IYGLLLDIAA DTLRTIAGDP RHLGAQIGAT LVLHTWGSAL THHPHVHGIV PGGGLSPDGE RWIACRPGFF LPVRVLSRLF RRRFLEALAD AHRRGQLQFF GEYTGLADPA TFARWLAPLR TCEWVVYAKR PFAGPEAVLE YLSRYTHRVA ISNQRLVAFD ERGVTFRWKD YRAKGRTRYK TMTLETGEFM RRFLLHVLPS GFHRIRHYGL LANPVRRARL ARVRDLLHIA PATSPSPDHA IIETRPVFIC RHCGAPMIVI DILARSAPIR APPMRLDQP
|
| |