| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6655 |
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| Symbol | |
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| ID | 6279805 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 2968958 |
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| End bp | 2969704 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642617687 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001890324 |
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| Protein GI | 187921292 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.332665 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.273672 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAATA CTCTTCAAGG AAAGATCGCT CTTGTGACCG GCGGCTCACG CGGAATTGGC
GCCGCAACCG CCATCCAGCT CGCTGCGGAA GGCGCCACCG TAGCGCTCAG TTATTCCAGC
AGTGAGGCCG CGGCCCAAGA GGTCATTGCA AGGATCGAAG CCTCCGGTGG AAAGGCTATT
GCTCTGAAGG CGGACCAGGC GGATGCAAAA GCGGTCAAGG CATTGATTGC GGAAGTTATC
GAGCGGTTGG GCCGGATCGA CATTCTCGTC AATAACGCCG CCGTTTTCGT CACAGGTACG
GTAGCCGAGA CCGCTGATAC ATCGGCCTTC GAGAGACAAG TGAAGATCAA TTACGAAGCC
GTGGTCACCG CAATCCGGGA AGCGTCGCGG GTGATGGATA GTGGCGGCCG GATTATCTCC
ATTTCGTCGG CCCTCGCCTG GCGATCAACC TGGCCTGGCC TTGCTGACTA CAGCGCAACG
AAGCGTGCGA TTGAAGGCTA CAGCAAAGGC GCCGCGCGAG ATCTCGGCCC GAAGGGCATT
ACTGTGAATG TTATCGGCAC CGGTTCGACG AATACCGAAA TGAATCCTGA TGACAGTCCC
TTTGCCGAGG CGCAGGCAGC CGCCACTGCG CTCGGGCGCT TCGGTCGGCC TGAAGAGATC
GCCTCGGTAA TCGCCTTCGT CGCCAGCCCG GCTGCGAGCT TCATTACCGG CGCAATCATT
CCCGTCGACG GTGGCTATAG CGCGTGA
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| Protein sequence | MANTLQGKIA LVTGGSRGIG AATAIQLAAE GATVALSYSS SEAAAQEVIA RIEASGGKAI
ALKADQADAK AVKALIAEVI ERLGRIDILV NNAAVFVTGT VAETADTSAF ERQVKINYEA
VVTAIREASR VMDSGGRIIS ISSALAWRST WPGLADYSAT KRAIEGYSKG AARDLGPKGI
TVNVIGTGST NTEMNPDDSP FAEAQAAATA LGRFGRPEEI ASVIAFVASP AASFITGAII
PVDGGYSA
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