| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6638 |
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| Symbol | |
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| ID | 6278308 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 2950271 |
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| End bp | 2951389 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642617670 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_001890307 |
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| Protein GI | 187921275 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATTC GTCACGCCAC CCTTCTTTCG CTCGCCGGCA CGATGCTGTG CTCGCTGACC
GCTTTGACCG CGATGAACGC CGCGCGCGCC GCGGATACAT CGCTGAATGT CTACAACTGG
TCCGACTACA TTGCGAAGGA CACGATTGCC AACTTCGAGA AGCAATCCGG CGTCACCGTG
AAATACGACA GTTACGATAG CGACGATACG TTGCAGGCCA AATTGCTCGC GGGCAGTTCG
GGCTATGACA TCGTAGTGCC GACATCGAGC TATATGGCGC GGCAGATCGA AGCCGGCGTG
TATCAGAAGA TCGACAAGTC GAAGATGCCC AACCTCGCCA ATCTCGATCC TGGTTTGATG
AAGCTGATTG CCGATGCCGA TCCTGGCAAT CAATACGGCG TGCCTTGGGC GTGGGGCACC
GATGGAATCG GCTACAACGT GCAGGCGGTG AAGCAAGCGC TCGGTGGTGA AGCGCCGGTG
GATAGCTGGT CGCTGTTGTT CGACCCGGCG AATCTGTCGA AGGTGAAGAG TTGCGGCGTG
TCCTTTCTCG ATTCGGCCGC GGATGTTTTC CCCGCTGTGC TTCAGTACAT GCATAAGAAT
CCGAACAGTA CCAATCCCGG CGACTACCAG GCCGCGTATG AAGTGCTGAA GAAGGTGCGG
CCGTATATCA CGCAGTTCAA TTCGTCCGGC TATATCAATG ATCTGGCGAA CAACGATATC
TGCGTGGCGT TCGGCTTTTC CGGCGATGTG GGGATTGCGC GGCGGCGTGC TTCCGAGGCC
AAGCGCACGT ATGAGGTTCG GTTTTCGAAT ATCAAGGACG CGGGTTTGGT TTGGATGGAC
GTGATGGTAA TTCCGAAGGA CGCGCCGCAT CCGGAAGCGG CGATGAAGTG GATGAACTAC
ATCGAAGATC CGAAAGTGAG TGCGGAGATT ACGAATGAGG TTTTTTACCC GACTGCGAAT
CGTGCGGCGC GGCAGTTTGT GACGCCGGCT ATTGAGCAGG ACGCGAATGT TTATCCGCCT
GAGGCCGTGT TGAACAAGAT GACGTTGATG CGGCCGCAGC CGGCGCCGAT CATGCGGTTG
GAGAATCGGC TTTGGGCGCA GTTGAAGTCG GGGAATTGA
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| Protein sequence | MKIRHATLLS LAGTMLCSLT ALTAMNAARA ADTSLNVYNW SDYIAKDTIA NFEKQSGVTV
KYDSYDSDDT LQAKLLAGSS GYDIVVPTSS YMARQIEAGV YQKIDKSKMP NLANLDPGLM
KLIADADPGN QYGVPWAWGT DGIGYNVQAV KQALGGEAPV DSWSLLFDPA NLSKVKSCGV
SFLDSAADVF PAVLQYMHKN PNSTNPGDYQ AAYEVLKKVR PYITQFNSSG YINDLANNDI
CVAFGFSGDV GIARRRASEA KRTYEVRFSN IKDAGLVWMD VMVIPKDAPH PEAAMKWMNY
IEDPKVSAEI TNEVFYPTAN RAARQFVTPA IEQDANVYPP EAVLNKMTLM RPQPAPIMRL
ENRLWAQLKS GN
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