| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6632 |
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| Symbol | |
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| ID | 6280322 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 2943940 |
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| End bp | 2944968 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642617664 |
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| Product | D-xylose ABC transporter, periplasmic substrate-binding protein |
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| Protein accession | YP_001890301 |
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| Protein GI | 187921269 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4213] ABC-type xylose transport system, periplasmic component |
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| TIGRFAM ID | [TIGR02634] D-xylose ABC transporter, substrate-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTCG CAACGCGTCG TACCGTATTG AGTTCGCTCG TCTGTGGAGC GGTGCTCGCC
AGCCTGTCGC TTGTCGCGCC GCTCGCGCAT GCAAGCAAGG ATCACCCGGA AATTGGCTTC
TGTATCGACG ATCTGCGCGT CGAGCGCTGG TCGCGCGATC GTGACTATTT CGTTGCCGCA
GCGGAAAAAC TCGGCGCGAA AGTGTCGGTG CAATCCGCCG ACGCGAGCGA AGCGCGCCAG
ATTTCGCAGA TCGAAAACCT GATCTCGCGC GGTGTCGATG TCATCGTGAT CGTGCCGTTC
AACTCGAAGA CGCTCGGCAA CGTGGTCGCC GAAGCGAAGA AAGCGGGCAT CAAGGTGGTT
TCATACGACC GCCTGATTCT CGATGCCGAC GTAGACGCTT ACATCTCCTT CGATAACGAA
AAGGTCGGCG AATTGCAGGC GCAAGGCGTC TACAACGCGC AACCGAAGGG CAACTACTTC
CTGCTCGGCG GCGCGCCGAC CGACAACAAC GCCAAGATGC TGCGCGAAGG CCAGCTCAAG
ATACTGAAGC CCGCCATCGA TAAGGGCGAT ATCAAAGTAG TCGGTCAGCA ATGGGTACCG
GAATGGAGCG CGTCCACGGC GCTGCGCATT GTCGAAGATG CGCTGACGGC GAATAACAAC
AAGATCGACG CGATCGTCGC CTCGAACGAC GGCACCGCCG GTGGCGCGAT CCAGGCGCTC
GCTGCGCAGC ACATGGCGGG CAAGGTGCCG GTGTCGGGCC AGGATGCCGA CCTCGCGGCC
GTGAAGCGTG TGATTGCCGG CACGCAGACC ATGACCGTCT ACAAGCCGCT GAAACTGATT
GCCGGCGAAG CGGCCAAGCT CTCTGTGGCG CTTGCAAAGG GCGAAAAACC CGCCTTTAAC
TCGCAATACG ACAACGGCAA GAAGAAAGTC GACACGGTGC TCCTGCAACC CACGTTGCTC
ACAAAGAGCA ATGTCGATGT AGTCGTCAAG GACGGCTTCT ATAGCCAGGC CCAGCTCGCG
AGCCAATGA
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| Protein sequence | MKFATRRTVL SSLVCGAVLA SLSLVAPLAH ASKDHPEIGF CIDDLRVERW SRDRDYFVAA
AEKLGAKVSV QSADASEARQ ISQIENLISR GVDVIVIVPF NSKTLGNVVA EAKKAGIKVV
SYDRLILDAD VDAYISFDNE KVGELQAQGV YNAQPKGNYF LLGGAPTDNN AKMLREGQLK
ILKPAIDKGD IKVVGQQWVP EWSASTALRI VEDALTANNN KIDAIVASND GTAGGAIQAL
AAQHMAGKVP VSGQDADLAA VKRVIAGTQT MTVYKPLKLI AGEAAKLSVA LAKGEKPAFN
SQYDNGKKKV DTVLLQPTLL TKSNVDVVVK DGFYSQAQLA SQ
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