| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6625 |
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| Symbol | |
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| ID | 6278270 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 2935293 |
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| End bp | 2936303 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642617657 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_001890294 |
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| Protein GI | 187921262 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAAAAAA CCTGGTTCTC CGTCGGTCAA ATTCTGCTGA CCCTGATCGT CGTCGTCGCC
GCGGCCCTCG TGCTGTGGAA ACTGGTTGGC TACTACATGT TCGCGCCGTG GACTCGCGAC
GGACACGTGC GCGCCGACGT GATCCAGGTC GCACCGGACA TCTCGGGACT GATTACGTCC
GTCGACGTAG TGGACAACCA GCAGGTCAAG CAAGGCCAGG TGCTGTTCGT GATCGATCAG
GCCCGCTACA CGCTCGCGCT GCGCCAGGCG CAGGCCACCG CGCAACAACG TCGTGCCACG
CTCGATCAGG CGCGCCGCGA AGACGCGCGT AATCGCAAGC TCGGCAACCT GGTCGCGGCG
GAGGTGTCGG AAGAAAGCCG CTCGCGCGTC GAGACTGGGG AAGCCGCGCT CGCCGACGCG
AACGTAGCGA TCGACACCGC GAAGCTGAAT CTGCAACGCG CCACGATCAT GAGTCCGGTC
GACGGTTATC TGAACGACCG CGCGCCGCGC GTCGGCGAAT ATGTCGCGGC GGGGCGCGCG
GTGGTCGCGG TGGTCGATAT GCATTCGTTC CGCGTCGACG GGTATTTCGA GGAAACCAAG
CTGCGTGGCA TCGACATCGG CCAGCCGGTC GATATCAAGG TGATGGGCGA ACCGGCGGTG
TTGCGCGGAC ATGTGCAGAG TATCGTCGCC GCAATCGAGG ATCGGGACCG CACGCAAGGT
TCGAATCTGC TGCCGAATGT GAATCCGGCT TTCAGTTGGG TGCGGCTCGC GCAACGGATT
CCGGTGCGTG TGGCGCTCGA TGAAGTGCCT GCGGATTTCC GCATGATCGC GGGGCGCACG
GCGACTGTGT CGGTGCGTGA TTTGTCGCCT GGCGGTAAGA AGCATCCGGA TGCGGGGGCG
TCGGGTGCGG TGGCGGCTTC GTCGTCGGCG TCGGCTGTTT CTACTGGCTC GGCTGCTTCG
GCTGCACAGC CGGCGTCGGC GGCGGTCTCA TCATCGGGCG CCTCGCAATG A
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| Protein sequence | MKKTWFSVGQ ILLTLIVVVA AALVLWKLVG YYMFAPWTRD GHVRADVIQV APDISGLITS
VDVVDNQQVK QGQVLFVIDQ ARYTLALRQA QATAQQRRAT LDQARREDAR NRKLGNLVAA
EVSEESRSRV ETGEAALADA NVAIDTAKLN LQRATIMSPV DGYLNDRAPR VGEYVAAGRA
VVAVVDMHSF RVDGYFEETK LRGIDIGQPV DIKVMGEPAV LRGHVQSIVA AIEDRDRTQG
SNLLPNVNPA FSWVRLAQRI PVRVALDEVP ADFRMIAGRT ATVSVRDLSP GGKKHPDAGA
SGAVAASSSA SAVSTGSAAS AAQPASAAVS SSGASQ
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