| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6623 |
|---|
| Symbol | |
|---|
| ID | 6280218 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | + |
|---|
| Start bp | 2932936 |
|---|
| End bp | 2935038 |
|---|
| Gene Length | 2103 bp |
|---|
| Protein Length | 700 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642617655 |
|---|
| Product | Fusaric acid resistance protein conserved region |
|---|
| Protein accession | YP_001890292 |
|---|
| Protein GI | 187921260 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1289] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCTACC CTTCCCTTCG CGACTGGCTG TTTTCGGTCA AGACATTTGC CGCGGCGATG
ATCGCGCTCT ACATCGGCCT CGCGCTCGAA CTGCCGCGGC CTTATTGGGC GATGGCCACC
GTCTACATCG TGTCGAATCC GTTTGTGGGC GCGACGCGCT CCAAGGCGCT CTATCGTGCG
CTCGGCACCA TGCTCGGCGC TTCGGCAGCG GTGCTGCTGG TGCCGCCCTT CGTCGAATCG
CCCTATCTGT TCAGCGTGAT CGTGGCGCTC TGGACCGGCA CGATGCTGTA TCTGGCCGTC
TCCGATCGCA CCGCGCGCAG CTACGTGTTC CTGCTGGCCG GTTATACGAT GCCGATCATC
GCGCTGCCCT CGGTGACCAA TCCGGGCGGC GTGTTCGATC TCGCGGTCAG CCGTACCGAG
GAGATCACGC TCGGCATTGT CTGCGCGAGC ATTGTCGGCA GCGCGCTGTT TCCAAGCCGG
CTTGCGCCCA CGATCATCAA ACAGACCGAC GCATGGTTTC GCGACGCCGC GTTCTACGCA
ACCGAAACGC TCTCCGGCCG GCTTGCCGGC TCGGCCATTT CGGGTGCGCG GCAACGCATC
GCGGCCACCA TCAACGGCCT TGAATTGCTG CTCAGCCAAC TGGCCTACGA TCACACGCGG
CCCGACATAC TGGCGCGCGC GCATGAACTG CGCGGGCGCA TGCAGTTGCT GCTGCCCATC
ATGTCCTCGC TCGCCGATCC GCTGATCGCG CTCTACAACA GCGGCCGGCA GACGTGGCCC
GAAGGGCTGG AAAGCCTGCT CGCCGACGTC ATCAAATGGT TCAACGAGCC GATGCCCGCC
GTGAGCGAGG GCTATCACCC GGACCGGACG GCCGACGCAT TGCGCGAGCG CATCGCGGCG
ATGCAACCGC CGCCGTCCGC GCTCGCGGGC TGGGATGGCG CGCTGCTCTC GAACGCGTTG
TGGCGCATGA AGCAGGTGAT CGATGTCTGG CAGGACTGCC GCTCGCTGCG CATCATCATC
ACGCGGGAAG AAGGCTCGTG GCGTCCGCGC TTCCGCCATT GGCGGCTGGG CGGCACGGAG
CGCTTCTACG ATCGCGGCAT CATGCTGTTC TCGACCGGCA CGGCTGCGGC GGCCGTGGTT
CTTGCGTGCA GTTTATGGAT CGGCTCGGGC TGGAACGACG GAGCGAGCGC CGTCACGCTC
GCGGCCGTGG CATGCTGCTT CTTCGCGGCG CTCGACGAGC CCGCGCCGTT CATCTTCCGC
TTCTTCGTGG CGACCGCCAT TAGCGTGGTG GCGGCGGGCG TCTATCTGTT CGTCGTGCTG
CCGCATGTGC ATGACTTTCC CATGCTGGTG ATCATGTTCG CCGCGCCGTT CATCTTCGTC
GGCACGCTGA TTCCACGCCC GCAGTTCAAC CTCGCCACGG TGCTGGTCGC CGTGAACACG
GCCACCTTCA TCAGCATTCA GGATGCTTAC GACGCCAACT TCCTGGTGTT CCTGAACAGC
AACATCGCAG GCCTCGCCGG CTTGCTCTAC GCGTATCTGT GGACGCGCGC AACGCGGCCG
TTCGGCGCCG AACTCGCGGC GGCCCGTCTG TTGCGTTCGA GCTGGGCCGA CGTGGCGCTC
ACGGCGTCGA CACGGCCGAT AGAAGATCCG CGCAATCTCG CCGCGCGCAT GCTCGACCGC
CTGATGCAAC TGATCCCGCG CCTTGCCGCG ACGGATGACC ATCGTCATCC GTCGATCGAA
AGCTTTCGCG ATCTGCGCAT CGCCTTCAAC GCACTCGATC TGCGCCGCCT GACCCACAAG
CTGGGCGGCG ACGCGCCGGC CGCGATCGAT CACGTGCTCG ACGACGTGCG GCAGTACTAT
GAAAGCTGCG TGGATCGCCG CAAGCGCGAG CCGGTGCCGG AGAGCCTGAT GTCGTCGATC
GACGCCGCCG TGGCGCGCGT GACGGCACAA GGGCTCGCCA ACGCAGGGGC GCCGAGCGCG
ACCTCGCAAA CGTCGGCGCG CCGGTTGCGC GAGGCTCTGC ACGCGCTGGT CGGCTTGCGT
CTTTCGCTGT TTCCGGCCAC GCTGACGCAA CCCGCGCCGC CCGAACCGGA GGCCGCTGCC
TGA
|
|---|
| Protein sequence | MVYPSLRDWL FSVKTFAAAM IALYIGLALE LPRPYWAMAT VYIVSNPFVG ATRSKALYRA
LGTMLGASAA VLLVPPFVES PYLFSVIVAL WTGTMLYLAV SDRTARSYVF LLAGYTMPII
ALPSVTNPGG VFDLAVSRTE EITLGIVCAS IVGSALFPSR LAPTIIKQTD AWFRDAAFYA
TETLSGRLAG SAISGARQRI AATINGLELL LSQLAYDHTR PDILARAHEL RGRMQLLLPI
MSSLADPLIA LYNSGRQTWP EGLESLLADV IKWFNEPMPA VSEGYHPDRT ADALRERIAA
MQPPPSALAG WDGALLSNAL WRMKQVIDVW QDCRSLRIII TREEGSWRPR FRHWRLGGTE
RFYDRGIMLF STGTAAAAVV LACSLWIGSG WNDGASAVTL AAVACCFFAA LDEPAPFIFR
FFVATAISVV AAGVYLFVVL PHVHDFPMLV IMFAAPFIFV GTLIPRPQFN LATVLVAVNT
ATFISIQDAY DANFLVFLNS NIAGLAGLLY AYLWTRATRP FGAELAAARL LRSSWADVAL
TASTRPIEDP RNLAARMLDR LMQLIPRLAA TDDHRHPSIE SFRDLRIAFN ALDLRRLTHK
LGGDAPAAID HVLDDVRQYY ESCVDRRKRE PVPESLMSSI DAAVARVTAQ GLANAGAPSA
TSQTSARRLR EALHALVGLR LSLFPATLTQ PAPPEPEAAA
|
|---|
| |