Gene Bphyt_6605 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_6605 
Symbol 
ID6279483 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp2911643 
End bp2912446 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content62% 
IMG OID642617638 
Producthypothetical protein 
Protein accessionYP_001890275 
Protein GI187921243 
COG category[S] Function unknown 
COG ID[COG3826] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.202488 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.0603228 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATACGG TTGCGAAAGA TATGCAGTCG CGCTCGCTGG AATTAACGCT GGACTTGAAA 
GCTGGCGCAG GACAGAAGCC AGAAGCGGGC AGGGGTGGCT CGCACGCGCA GCGTATCGGT
GCGATCGACT GGTTCGATGT CGAAGCAGAG TTGAATGCTT ACGGCTGCGC GATGCTGCGC
AATCTGCTCA GCTCGGAGGA ATGCGATGCG CTGACCGCGC TCTATCCGCG CGATGCGTTG
TTTCGTAGCC GCGTCGTCAT GGCGCGACAC GGTTTTGGCC GCGGCGAATA CAAGTACTTT
GCTTATCCGC TGCCGCCGTT GATCGCCGAT TTGCGCTGCG CGCTTTATCC GCGTCTCGCG
CCGGTGGCGA ATCGCTGGAA CGAGGCGATG GGGATCGGCG TTCGATATCC GGCCGCGCAC
GCGGAATTTA TCGAGCGTTG TCACGCCGCC GGTCAGACGC GCCCTACACC GCTAATGCTT
CAATACGCAC CCGACGACTA CAACTGCCTG CATCAGGATC TCTACGGCGA ACACGTCTTC
CCGCTGCAGG TCGCGATTCT GCTGTCCGAA CCCGGCGTGG ACTTCACCGG TGGCGAATTC
GTCATGACGG AGCAGCGGCC GCGCATGCAG TCGCGTACGG AAGTGGTGCC GCTCCGCAAG
GGCGATGCGG TGGTGTTCGC GGTCCATCAC CGGCCGGTTC AGGGGACGCG TGGTCCGTAT
CGGGTGAATC TGCGGCATGG CGTGAGCCGC TTGCGCTCAG GCCAACGGCA TACGCTTGGG
GTGATTTTCC ACGATGCGAC CTGA
 
Protein sequence
MDTVAKDMQS RSLELTLDLK AGAGQKPEAG RGGSHAQRIG AIDWFDVEAE LNAYGCAMLR 
NLLSSEECDA LTALYPRDAL FRSRVVMARH GFGRGEYKYF AYPLPPLIAD LRCALYPRLA
PVANRWNEAM GIGVRYPAAH AEFIERCHAA GQTRPTPLML QYAPDDYNCL HQDLYGEHVF
PLQVAILLSE PGVDFTGGEF VMTEQRPRMQ SRTEVVPLRK GDAVVFAVHH RPVQGTRGPY
RVNLRHGVSR LRSGQRHTLG VIFHDAT