Gene Bphyt_6604 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_6604 
Symbol 
ID6277524 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp2910509 
End bp2911351 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content63% 
IMG OID642617637 
Producthypothetical protein 
Protein accessionYP_001890274 
Protein GI187921242 
COG category[S] Function unknown 
COG ID[COG3777] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.316689 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.0307895 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGCTT CCCCGCAGAA ACTCGACGAC TGGCTCGACA AGCAGGAGGT GCTTAAGGAC 
GACATCACCG CCTTTCCACT AAAGGCGATG GCCGCTACGC TCGATCGCGA AGAAAGCGGC
GACAGCGTGC CGCCGCTGTG GCATTGGCTG TACTTTCTGC CGGTTGCGCC GATGTCCGAA
GTCGGCCCGG ACGGCCATCC GAAACGCGGC GGTTTCCTGC CGCCCGTGCC GCTGCCGCGC
CGCATGTGGG CCGGCGGCCG CCTGACTTTT CACACGCCGC TGAAGGTGGG CGAGCGTGCC
ACGCGTACTT CGACGATCGC CAATATCGAA GACAAGACCG GCCGGTCCGG CCGTCTCGTG
TTCGTCACGG TGCAGCACAC CATTGAAGCC GGCGGCGAAC TGAAGCTCGA AGAGGAGCAC
GACATCGTCT ATCGCGGCGC GCCGCAGGAC GGCGCCCGTC CACCGCAGCC GCAGCTCGCC
CCAAAAGGCG AAACGTGGCG CCGCACGATC GACGCCGACG CAGTCATGCT GTTCCGTTAC
TCGGCACTGA CCTTCAACGG CCACCGCATT CATTACGACT ATCCCTACGT CACGGAAGTC
GAAGGTTATC CGGGCCTGAT CGTCCACGGT CCGTTGATCG CGACTTTGCT TGTCGACCTG
GTGCGCCGCG AACAACCGCA AGCCACGCTG CAAAGTTTCG CTTTCAAGGC GGTACGTCCG
ACCTTCGCCG GCCATGCTTT CACGGTATGC GGCAAGCCAT CCGCCGACGG CAAGATCATC
GAGTTGTGGG CCAAAGACCA CGAAGGCTAT CTGACCATGC GCGCCACGGC CGCTATTGCC
TGA
 
Protein sequence
MSASPQKLDD WLDKQEVLKD DITAFPLKAM AATLDREESG DSVPPLWHWL YFLPVAPMSE 
VGPDGHPKRG GFLPPVPLPR RMWAGGRLTF HTPLKVGERA TRTSTIANIE DKTGRSGRLV
FVTVQHTIEA GGELKLEEEH DIVYRGAPQD GARPPQPQLA PKGETWRRTI DADAVMLFRY
SALTFNGHRI HYDYPYVTEV EGYPGLIVHG PLIATLLVDL VRREQPQATL QSFAFKAVRP
TFAGHAFTVC GKPSADGKII ELWAKDHEGY LTMRATAAIA