Gene Bphyt_6600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_6600 
Symbol 
ID6278006 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp2905840 
End bp2906652 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content66% 
IMG OID642617633 
ProductHpcH/HpaI aldolase 
Protein accessionYP_001890270 
Protein GI187921238 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2301] Citrate lyase beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.186422 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.0929834 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCG CACTGCCGCG CTCCTATCTG TTTGTGCCGG GCAACCGCCC TGAGCGCTTC 
GAAAAAGCGC ACGCAGCTGG CGCGGACGCG GTGATTCTCG ATCTCGAAGA TGCCGTGCAG
CCCGCTGAAA AACCGGCGGC GCGCGCGGCG GTGCTCGCCG CTGTATCGAG CGAAGCATCA
CGGCCCGCGT GGGTGCGCAT CAACGGTTCG GACACGCCCT GGTTCAACGA GGATGTCGCC
GCGCTGTCCG GACAGCCGGG TGTCGCAGGG ATCGTGTTGC CTAAAGCGGA GACGCGTGAA
CAGATCGAGG CCGTGCTGGC GACGGCGCAT GCCGCTTTAA GCATATTGCC GATCATTGAA
ACCGCGCGTG GGTTTGCGAG CCTCGCGGTC TTGTGCGCCG CGCCGCGCGT GCAGCGCATC
GTGTTCGGCA CGCTGGATTT TCAGATCGAT CTCGGTATCG ACGGCGACGG CGAGGAACTG
TATCTGTTCC GCTCGCAGAT CGTGCTGGCG TCGCGGCTTG CCGGAATCGG CGCGCCGGTG
GACGGCGTGT CGACCACCAT CACCGACACG GACGCCATCG AAGCCGACGC GCGCCTCGGC
CGGCGTTTCG GCTTCGGCGG CAAGCTGTGC ATTCATCCGA AGCAGATCGA TGCGGTGCAC
CGCGCGTACG CGTGGAGCGA CGCGGACAAG GCATGGGCGC AACGTGTCCT GGCCGCAGTG
GAAACGAGCC ACGGCGCGGC GGTGGCGGTG GACGGCAAGA TGGTCGATAT GCCGGTGATC
CTGAAGGCGC GAAGGATTCT TGCGGGCGCC TAG
 
Protein sequence
MSAALPRSYL FVPGNRPERF EKAHAAGADA VILDLEDAVQ PAEKPAARAA VLAAVSSEAS 
RPAWVRINGS DTPWFNEDVA ALSGQPGVAG IVLPKAETRE QIEAVLATAH AALSILPIIE
TARGFASLAV LCAAPRVQRI VFGTLDFQID LGIDGDGEEL YLFRSQIVLA SRLAGIGAPV
DGVSTTITDT DAIEADARLG RRFGFGGKLC IHPKQIDAVH RAYAWSDADK AWAQRVLAAV
ETSHGAAVAV DGKMVDMPVI LKARRILAGA