| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6600 |
|---|
| Symbol | |
|---|
| ID | 6278006 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | - |
|---|
| Start bp | 2905840 |
|---|
| End bp | 2906652 |
|---|
| Gene Length | 813 bp |
|---|
| Protein Length | 270 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642617633 |
|---|
| Product | HpcH/HpaI aldolase |
|---|
| Protein accession | YP_001890270 |
|---|
| Protein GI | 187921238 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2301] Citrate lyase beta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.186422 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.0929834 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCCG CACTGCCGCG CTCCTATCTG TTTGTGCCGG GCAACCGCCC TGAGCGCTTC
GAAAAAGCGC ACGCAGCTGG CGCGGACGCG GTGATTCTCG ATCTCGAAGA TGCCGTGCAG
CCCGCTGAAA AACCGGCGGC GCGCGCGGCG GTGCTCGCCG CTGTATCGAG CGAAGCATCA
CGGCCCGCGT GGGTGCGCAT CAACGGTTCG GACACGCCCT GGTTCAACGA GGATGTCGCC
GCGCTGTCCG GACAGCCGGG TGTCGCAGGG ATCGTGTTGC CTAAAGCGGA GACGCGTGAA
CAGATCGAGG CCGTGCTGGC GACGGCGCAT GCCGCTTTAA GCATATTGCC GATCATTGAA
ACCGCGCGTG GGTTTGCGAG CCTCGCGGTC TTGTGCGCCG CGCCGCGCGT GCAGCGCATC
GTGTTCGGCA CGCTGGATTT TCAGATCGAT CTCGGTATCG ACGGCGACGG CGAGGAACTG
TATCTGTTCC GCTCGCAGAT CGTGCTGGCG TCGCGGCTTG CCGGAATCGG CGCGCCGGTG
GACGGCGTGT CGACCACCAT CACCGACACG GACGCCATCG AAGCCGACGC GCGCCTCGGC
CGGCGTTTCG GCTTCGGCGG CAAGCTGTGC ATTCATCCGA AGCAGATCGA TGCGGTGCAC
CGCGCGTACG CGTGGAGCGA CGCGGACAAG GCATGGGCGC AACGTGTCCT GGCCGCAGTG
GAAACGAGCC ACGGCGCGGC GGTGGCGGTG GACGGCAAGA TGGTCGATAT GCCGGTGATC
CTGAAGGCGC GAAGGATTCT TGCGGGCGCC TAG
|
|---|
| Protein sequence | MSAALPRSYL FVPGNRPERF EKAHAAGADA VILDLEDAVQ PAEKPAARAA VLAAVSSEAS
RPAWVRINGS DTPWFNEDVA ALSGQPGVAG IVLPKAETRE QIEAVLATAH AALSILPIIE
TARGFASLAV LCAAPRVQRI VFGTLDFQID LGIDGDGEEL YLFRSQIVLA SRLAGIGAPV
DGVSTTITDT DAIEADARLG RRFGFGGKLC IHPKQIDAVH RAYAWSDADK AWAQRVLAAV
ETSHGAAVAV DGKMVDMPVI LKARRILAGA
|
|---|
| |