Gene Bphyt_6599 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_6599 
Symbol 
ID6277325 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp2904216 
End bp2905595 
Gene Length1380 bp 
Protein Length459 aa 
Translation table11 
GC content64% 
IMG OID642617632 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_001890269 
Protein GI187921237 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.332731 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.158495 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCAACCG TCAATTCCGG CGCGCGGCTC GACCGCCTGC CCATCAGCCG TTTTCACTGG 
AACATTCTCG GCCTGATCGG CGCGGGCGCT TTCCTCGATG CCTTCGACAT CTATCTTGCC
AACGGCGCAT TAGCCGCGAT GGTCAAAAGC GGCTTCACCG ATTTGCGGCT CGGCTCGTTT
TTCATCTCCG CGACCTTCAT GGGCATGATG ATCGGTGCCG GTCTGTCCGG TTATCTCGGC
GACAGATTCG GCCGGCGTTA TTCGTATCAG GCGAACCTGG CGATTTTCGG TCTCGCCTCG
ATTGCCGCGT GTTTCGCGCC GAATATCTAC TGGCTGATTC TGTTGCGTTT CATCATGGGC
GTGGGGCTCG GCGCGGAATT GGTGGTGGCG GCCGGAACGT TGTGCGAATT CGTGCCGCCG
GCCACGCGCG GACGCTGGAC TTCGCTGCTT GCGTTGATCA TCAATTCCGG TCTGCTCGGT
GCGACGGCGA TCGGCTACTG GGTGATTCCA CATCTCGGTT GGCGCTATAT GTTTGCGATC
GCCGGGATCG GTGCGCTCGT CGTGTGGTTT CTGCGGCATC GGATGCCGGA ATCGCCGCGC
TGGCTGGAGA CGGTCGGACG CCTCGACGAA GCCGAGGCGA CGGTGTCGGC GATCGAGCGG
CAGGTCGAGG CGCGGGTCGG CAAGTTACCG CCGGTGGCGC GCGTGATGAG CCATGAGGTG
CCGGCCGCGC CGTTCTCGGC GCTGTTCGCG CGCGGCATGA TCGGCCGCAC GCTGGTGGCG
GCGCTCACCT GCATGGCGAT CAACATGTCG CTGTATGGAT TCGTCGCGTG GCTGCCGACG
TTCTTCGTCA AGGAAGGGCT GACGATCGTG CAGTCGCTGG GATTCGTGCT GCTGATGTCG
TTCGGCGCGC CGGCCGGCGC GGTGGTCGGG TATCTGGTCA CGGACCGGAT CGGCCGGCGC
AACGGCATCG TGCTGTTCTC GCTCGTGACG ATCGCGCTCG GGTTCGTGTA CGTGCAGATG
CGGGCGCCGG CGGCGATTTC CATCGTGGGT TTCGCACTCG TGACGGCGAT CTATACGGTC
TGCACGCTGG GATTGTTCGG CTATATCCCG GAGTTGTTTC CGACCGCGCA TCGGCTGCGG
GGGACGGGCG TCGCCGGCAC CTGCGGACGC GCCGCCTCCA TGTCGACGCC GTATGTGGCG
CTGCTGTTGT ACACGCACTT TGGCGTGACG GGCGTGCTGA CGATGGTCGG CGGTGTTCTG
CTGTTGCTGA GTGTAGCGAT CCTCGCGTTG CGGATCGAAA CGAGTCAGCA GACGCTCGAA
GACATCTCGC CCGATGCCGA TCTGACGCCG AGCGGGGAGT TGTTCGAAAA GTCGGTTTAG
 
Protein sequence
MATVNSGARL DRLPISRFHW NILGLIGAGA FLDAFDIYLA NGALAAMVKS GFTDLRLGSF 
FISATFMGMM IGAGLSGYLG DRFGRRYSYQ ANLAIFGLAS IAACFAPNIY WLILLRFIMG
VGLGAELVVA AGTLCEFVPP ATRGRWTSLL ALIINSGLLG ATAIGYWVIP HLGWRYMFAI
AGIGALVVWF LRHRMPESPR WLETVGRLDE AEATVSAIER QVEARVGKLP PVARVMSHEV
PAAPFSALFA RGMIGRTLVA ALTCMAINMS LYGFVAWLPT FFVKEGLTIV QSLGFVLLMS
FGAPAGAVVG YLVTDRIGRR NGIVLFSLVT IALGFVYVQM RAPAAISIVG FALVTAIYTV
CTLGLFGYIP ELFPTAHRLR GTGVAGTCGR AASMSTPYVA LLLYTHFGVT GVLTMVGGVL
LLLSVAILAL RIETSQQTLE DISPDADLTP SGELFEKSV