Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_6599 |
Symbol | |
ID | 6277325 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 2904216 |
End bp | 2905595 |
Gene Length | 1380 bp |
Protein Length | 459 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642617632 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_001890269 |
Protein GI | 187921237 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.332731 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.158495 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGCAACCG TCAATTCCGG CGCGCGGCTC GACCGCCTGC CCATCAGCCG TTTTCACTGG AACATTCTCG GCCTGATCGG CGCGGGCGCT TTCCTCGATG CCTTCGACAT CTATCTTGCC AACGGCGCAT TAGCCGCGAT GGTCAAAAGC GGCTTCACCG ATTTGCGGCT CGGCTCGTTT TTCATCTCCG CGACCTTCAT GGGCATGATG ATCGGTGCCG GTCTGTCCGG TTATCTCGGC GACAGATTCG GCCGGCGTTA TTCGTATCAG GCGAACCTGG CGATTTTCGG TCTCGCCTCG ATTGCCGCGT GTTTCGCGCC GAATATCTAC TGGCTGATTC TGTTGCGTTT CATCATGGGC GTGGGGCTCG GCGCGGAATT GGTGGTGGCG GCCGGAACGT TGTGCGAATT CGTGCCGCCG GCCACGCGCG GACGCTGGAC TTCGCTGCTT GCGTTGATCA TCAATTCCGG TCTGCTCGGT GCGACGGCGA TCGGCTACTG GGTGATTCCA CATCTCGGTT GGCGCTATAT GTTTGCGATC GCCGGGATCG GTGCGCTCGT CGTGTGGTTT CTGCGGCATC GGATGCCGGA ATCGCCGCGC TGGCTGGAGA CGGTCGGACG CCTCGACGAA GCCGAGGCGA CGGTGTCGGC GATCGAGCGG CAGGTCGAGG CGCGGGTCGG CAAGTTACCG CCGGTGGCGC GCGTGATGAG CCATGAGGTG CCGGCCGCGC CGTTCTCGGC GCTGTTCGCG CGCGGCATGA TCGGCCGCAC GCTGGTGGCG GCGCTCACCT GCATGGCGAT CAACATGTCG CTGTATGGAT TCGTCGCGTG GCTGCCGACG TTCTTCGTCA AGGAAGGGCT GACGATCGTG CAGTCGCTGG GATTCGTGCT GCTGATGTCG TTCGGCGCGC CGGCCGGCGC GGTGGTCGGG TATCTGGTCA CGGACCGGAT CGGCCGGCGC AACGGCATCG TGCTGTTCTC GCTCGTGACG ATCGCGCTCG GGTTCGTGTA CGTGCAGATG CGGGCGCCGG CGGCGATTTC CATCGTGGGT TTCGCACTCG TGACGGCGAT CTATACGGTC TGCACGCTGG GATTGTTCGG CTATATCCCG GAGTTGTTTC CGACCGCGCA TCGGCTGCGG GGGACGGGCG TCGCCGGCAC CTGCGGACGC GCCGCCTCCA TGTCGACGCC GTATGTGGCG CTGCTGTTGT ACACGCACTT TGGCGTGACG GGCGTGCTGA CGATGGTCGG CGGTGTTCTG CTGTTGCTGA GTGTAGCGAT CCTCGCGTTG CGGATCGAAA CGAGTCAGCA GACGCTCGAA GACATCTCGC CCGATGCCGA TCTGACGCCG AGCGGGGAGT TGTTCGAAAA GTCGGTTTAG
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Protein sequence | MATVNSGARL DRLPISRFHW NILGLIGAGA FLDAFDIYLA NGALAAMVKS GFTDLRLGSF FISATFMGMM IGAGLSGYLG DRFGRRYSYQ ANLAIFGLAS IAACFAPNIY WLILLRFIMG VGLGAELVVA AGTLCEFVPP ATRGRWTSLL ALIINSGLLG ATAIGYWVIP HLGWRYMFAI AGIGALVVWF LRHRMPESPR WLETVGRLDE AEATVSAIER QVEARVGKLP PVARVMSHEV PAAPFSALFA RGMIGRTLVA ALTCMAINMS LYGFVAWLPT FFVKEGLTIV QSLGFVLLMS FGAPAGAVVG YLVTDRIGRR NGIVLFSLVT IALGFVYVQM RAPAAISIVG FALVTAIYTV CTLGLFGYIP ELFPTAHRLR GTGVAGTCGR AASMSTPYVA LLLYTHFGVT GVLTMVGGVL LLLSVAILAL RIETSQQTLE DISPDADLTP SGELFEKSV
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